Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.69■□□□□ 0.26
Hcn3O88705 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hcn3O88705 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hcn3O88705 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.69■□□□□ 0.26
Hcn3O88705 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hcn3O88705 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.69■□□□□ 0.26
Hcn3O88705 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hcn3O88705 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Hcn3O88705 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hcn3O88705 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hcn3O88705 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn3O88705 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn3O88705 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn3O88705 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn3O88705 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Hcn3O88705 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn3O88705 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn3O88705 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.68■□□□□ 0.26
Hcn3O88705 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn3O88705 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.68■□□□□ 0.26
Hcn3O88705 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.68■□□□□ 0.26
Hcn3O88705 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn3O88705 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn3O88705 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn3O88705 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn3O88705 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn3O88705 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn3O88705 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn3O88705 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.68■□□□□ 0.26
Hcn3O88705 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hcn3O88705 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Hcn3O88705 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn3O88705 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn3O88705 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn3O88705 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn3O88705 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn3O88705 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Hcn3O88705 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn3O88705 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Hcn3O88705 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn3O88705 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Hcn3O88705 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Hcn3O88705 Gm13534-201ENSMUST00000121169 513 ntBASIC16.67■□□□□ 0.26
Hcn3O88705 Gm7514-201ENSMUST00000209475 934 ntBASIC16.67■□□□□ 0.26
Hcn3O88705 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn3O88705 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Hcn3O88705 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn3O88705 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Hcn3O88705 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn3O88705 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn3O88705 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Hcn3O88705 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn3O88705 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn3O88705 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn3O88705 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn3O88705 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Hcn3O88705 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Hcn3O88705 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hcn3O88705 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Hcn3O88705 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Hcn3O88705 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn3O88705 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn3O88705 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn3O88705 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn3O88705 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn3O88705 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Hcn3O88705 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn3O88705 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn3O88705 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Hcn3O88705 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn3O88705 Gm22325-201ENSMUST00000158904 308 ntBASIC16.66■□□□□ 0.26
Hcn3O88705 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Hcn3O88705 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Hcn3O88705 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn3O88705 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.66■□□□□ 0.26
Hcn3O88705 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn3O88705 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn3O88705 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.66■□□□□ 0.26
Hcn3O88705 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hcn3O88705 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn3O88705 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn3O88705 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn3O88705 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn3O88705 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn3O88705 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn3O88705 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn3O88705 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn3O88705 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn3O88705 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.65■□□□□ 0.26
Hcn3O88705 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.65■□□□□ 0.26
Hcn3O88705 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.65■□□□□ 0.26
Hcn3O88705 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn3O88705 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn3O88705 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.65■□□□□ 0.26
Hcn3O88705 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn3O88705 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Hcn3O88705 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn3O88705 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Hcn3O88705 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hcn3O88705 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms