Protein–RNA interactions for Protein: O88507

Cntfr, Ciliary neurotrophic factor receptor subunit alpha, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CntfrO88507 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CntfrO88507 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CntfrO88507 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CntfrO88507 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CntfrO88507 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CntfrO88507 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CntfrO88507 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CntfrO88507 Mir7071-201ENSMUST00000184847 69 ntBASIC14.1□□□□□ -0.15
CntfrO88507 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CntfrO88507 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CntfrO88507 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
CntfrO88507 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CntfrO88507 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CntfrO88507 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CntfrO88507 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CntfrO88507 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CntfrO88507 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CntfrO88507 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CntfrO88507 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CntfrO88507 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CntfrO88507 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CntfrO88507 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CntfrO88507 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CntfrO88507 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CntfrO88507 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CntfrO88507 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CntfrO88507 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CntfrO88507 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.09□□□□□ -0.15
CntfrO88507 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.09□□□□□ -0.15
CntfrO88507 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CntfrO88507 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CntfrO88507 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CntfrO88507 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CntfrO88507 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CntfrO88507 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CntfrO88507 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
CntfrO88507 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CntfrO88507 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CntfrO88507 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CntfrO88507 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CntfrO88507 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CntfrO88507 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.08□□□□□ -0.15
CntfrO88507 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CntfrO88507 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CntfrO88507 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CntfrO88507 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CntfrO88507 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CntfrO88507 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.08□□□□□ -0.16
CntfrO88507 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.08□□□□□ -0.16
CntfrO88507 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.08□□□□□ -0.16
CntfrO88507 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CntfrO88507 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.08□□□□□ -0.16
CntfrO88507 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.08□□□□□ -0.16
CntfrO88507 Gm30025-201ENSMUST00000218555 728 ntBASIC14.08□□□□□ -0.16
CntfrO88507 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CntfrO88507 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CntfrO88507 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CntfrO88507 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CntfrO88507 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.08□□□□□ -0.16
CntfrO88507 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CntfrO88507 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CntfrO88507 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CntfrO88507 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CntfrO88507 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CntfrO88507 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CntfrO88507 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CntfrO88507 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CntfrO88507 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
CntfrO88507 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CntfrO88507 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CntfrO88507 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CntfrO88507 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CntfrO88507 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.07□□□□□ -0.16
CntfrO88507 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.07□□□□□ -0.16
CntfrO88507 Gm24841-201ENSMUST00000158676 357 ntBASIC14.07□□□□□ -0.16
CntfrO88507 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CntfrO88507 Mir8112-201ENSMUST00000184382 131 ntBASIC14.07□□□□□ -0.16
CntfrO88507 Gm38027-201ENSMUST00000192315 235 ntBASIC14.07□□□□□ -0.16
CntfrO88507 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.07□□□□□ -0.16
CntfrO88507 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.07□□□□□ -0.16
CntfrO88507 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.07□□□□□ -0.16
CntfrO88507 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CntfrO88507 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CntfrO88507 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CntfrO88507 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CntfrO88507 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CntfrO88507 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CntfrO88507 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CntfrO88507 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.07□□□□□ -0.16
CntfrO88507 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CntfrO88507 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CntfrO88507 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CntfrO88507 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CntfrO88507 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CntfrO88507 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CntfrO88507 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CntfrO88507 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CntfrO88507 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CntfrO88507 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CntfrO88507 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms