Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf17O88472 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.17■□□□□ 0.18
Tnfrsf17O88472 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.17■□□□□ 0.18
Tnfrsf17O88472 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.17■□□□□ 0.18
Tnfrsf17O88472 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.17■□□□□ 0.18
Tnfrsf17O88472 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf17O88472 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf17O88472 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf17O88472 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf17O88472 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf17O88472 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.16■□□□□ 0.18
Tnfrsf17O88472 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf17O88472 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf17O88472 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf17O88472 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf17O88472 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf17O88472 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf17O88472 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Tnfrsf17O88472 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.16■□□□□ 0.18
Tnfrsf17O88472 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.16■□□□□ 0.18
Tnfrsf17O88472 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.16■□□□□ 0.18
Tnfrsf17O88472 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
Tnfrsf17O88472 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf17O88472 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf17O88472 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf17O88472 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf17O88472 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf17O88472 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf17O88472 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf17O88472 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.15■□□□□ 0.18
Tnfrsf17O88472 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf17O88472 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.15■□□□□ 0.18
Tnfrsf17O88472 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.15■□□□□ 0.18
Tnfrsf17O88472 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.15■□□□□ 0.18
Tnfrsf17O88472 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf17O88472 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf17O88472 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf17O88472 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf17O88472 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf17O88472 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf17O88472 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf17O88472 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Tnfrsf17O88472 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf17O88472 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf17O88472 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf17O88472 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf17O88472 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf17O88472 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf17O88472 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf17O88472 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Tnfrsf17O88472 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf17O88472 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Tnfrsf17O88472 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf17O88472 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf17O88472 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf17O88472 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf17O88472 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf17O88472 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Tnfrsf17O88472 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf17O88472 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf17O88472 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf17O88472 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.13■□□□□ 0.17
Tnfrsf17O88472 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.13■□□□□ 0.17
Tnfrsf17O88472 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Tnfrsf17O88472 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf17O88472 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Tnfrsf17O88472 Rps4l-201ENSMUST00000071745 943 ntBASIC16.13■□□□□ 0.17
Tnfrsf17O88472 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf17O88472 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf17O88472 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf17O88472 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf17O88472 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf17O88472 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf17O88472 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf17O88472 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf17O88472 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.12■□□□□ 0.17
Tnfrsf17O88472 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.12■□□□□ 0.17
Tnfrsf17O88472 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf17O88472 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf17O88472 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf17O88472 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf17O88472 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf17O88472 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf17O88472 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf17O88472 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Tnfrsf17O88472 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tnfrsf17O88472 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf17O88472 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf17O88472 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf17O88472 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf17O88472 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.11■□□□□ 0.17
Tnfrsf17O88472 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf17O88472 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf17O88472 Gm27702-201ENSMUST00000184512 56 ntBASIC16.11■□□□□ 0.17
Tnfrsf17O88472 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf17O88472 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf17O88472 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf17O88472 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf17O88472 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tnfrsf17O88472 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms