Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc4a4O88343 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Slc4a4O88343 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Slc4a4O88343 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc4a4O88343 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Slc4a4O88343 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Slc4a4O88343 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc4a4O88343 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slc4a4O88343 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slc4a4O88343 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.57■□□□□ 0.88
Slc4a4O88343 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc4a4O88343 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slc4a4O88343 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc4a4O88343 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.57■□□□□ 0.88
Slc4a4O88343 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc4a4O88343 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc4a4O88343 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc4a4O88343 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc4a4O88343 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc4a4O88343 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc4a4O88343 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc4a4O88343 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.56■□□□□ 0.88
Slc4a4O88343 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc4a4O88343 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.56■□□□□ 0.88
Slc4a4O88343 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Slc4a4O88343 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Slc4a4O88343 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc4a4O88343 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc4a4O88343 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc4a4O88343 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc4a4O88343 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc4a4O88343 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc4a4O88343 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc4a4O88343 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc4a4O88343 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc4a4O88343 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc4a4O88343 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc4a4O88343 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc4a4O88343 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc4a4O88343 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc4a4O88343 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc4a4O88343 Gm7791-201ENSMUST00000219066 539 ntBASIC20.55■□□□□ 0.88
Slc4a4O88343 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.55■□□□□ 0.88
Slc4a4O88343 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc4a4O88343 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc4a4O88343 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc4a4O88343 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc4a4O88343 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc4a4O88343 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc4a4O88343 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.54■□□□□ 0.88
Slc4a4O88343 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc4a4O88343 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slc4a4O88343 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc4a4O88343 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc4a4O88343 Gm37025-201ENSMUST00000195159 829 ntBASIC20.54■□□□□ 0.88
Slc4a4O88343 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.54■□□□□ 0.88
Slc4a4O88343 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc4a4O88343 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc4a4O88343 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc4a4O88343 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc4a4O88343 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slc4a4O88343 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc4a4O88343 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slc4a4O88343 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc4a4O88343 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slc4a4O88343 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc4a4O88343 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc4a4O88343 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.53■□□□□ 0.88
Slc4a4O88343 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc4a4O88343 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc4a4O88343 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc4a4O88343 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc4a4O88343 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc4a4O88343 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc4a4O88343 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc4a4O88343 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Slc4a4O88343 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slc4a4O88343 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Slc4a4O88343 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc4a4O88343 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc4a4O88343 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc4a4O88343 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Slc4a4O88343 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.52■□□□□ 0.88
Slc4a4O88343 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Slc4a4O88343 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.52■□□□□ 0.88
Slc4a4O88343 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.52■□□□□ 0.88
Slc4a4O88343 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.52■□□□□ 0.88
Slc4a4O88343 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc4a4O88343 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Slc4a4O88343 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc4a4O88343 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc4a4O88343 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc4a4O88343 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc4a4O88343 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.52■□□□□ 0.88
Slc4a4O88343 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Slc4a4O88343 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slc4a4O88343 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slc4a4O88343 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slc4a4O88343 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.51■□□□□ 0.87
Slc4a4O88343 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms