Protein–RNA interactions for Protein: O70228

Atp9a, Probable phospholipid-transporting ATPase IIA, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp9aO70228 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp9aO70228 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp9aO70228 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp9aO70228 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Atp9aO70228 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Atp9aO70228 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.3■□□□□ 0.68
Atp9aO70228 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.3■□□□□ 0.68
Atp9aO70228 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Atp9aO70228 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.3■□□□□ 0.68
Atp9aO70228 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp9aO70228 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp9aO70228 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp9aO70228 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp9aO70228 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.3■□□□□ 0.68
Atp9aO70228 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Atp9aO70228 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp9aO70228 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.29■□□□□ 0.68
Atp9aO70228 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Atp9aO70228 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp9aO70228 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp9aO70228 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.29■□□□□ 0.68
Atp9aO70228 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp9aO70228 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp9aO70228 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp9aO70228 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Atp9aO70228 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Atp9aO70228 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Atp9aO70228 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Atp9aO70228 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.28■□□□□ 0.68
Atp9aO70228 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atp9aO70228 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp9aO70228 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp9aO70228 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp9aO70228 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Atp9aO70228 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp9aO70228 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp9aO70228 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.28■□□□□ 0.68
Atp9aO70228 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp9aO70228 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Atp9aO70228 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Atp9aO70228 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Atp9aO70228 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atp9aO70228 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atp9aO70228 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.27■□□□□ 0.68
Atp9aO70228 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atp9aO70228 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atp9aO70228 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atp9aO70228 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atp9aO70228 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atp9aO70228 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atp9aO70228 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.27■□□□□ 0.68
Atp9aO70228 Gm17661-201ENSMUST00000170317 270 ntBASIC19.27■□□□□ 0.68
Atp9aO70228 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Atp9aO70228 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.27■□□□□ 0.68
Atp9aO70228 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Atp9aO70228 Rarb-207ENSMUST00000225921 2756 ntBASIC19.27■□□□□ 0.68
Atp9aO70228 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Atp9aO70228 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
Atp9aO70228 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.27■□□□□ 0.67
Atp9aO70228 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Atp9aO70228 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atp9aO70228 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.26■□□□□ 0.67
Atp9aO70228 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Atp9aO70228 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atp9aO70228 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atp9aO70228 Gm16061-201ENSMUST00000122167 857 ntBASIC19.26■□□□□ 0.67
Atp9aO70228 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.26■□□□□ 0.67
Atp9aO70228 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atp9aO70228 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.26■□□□□ 0.67
Atp9aO70228 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atp9aO70228 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Atp9aO70228 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Atp9aO70228 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atp9aO70228 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp9aO70228 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp9aO70228 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp9aO70228 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp9aO70228 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp9aO70228 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atp9aO70228 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp9aO70228 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atp9aO70228 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp9aO70228 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp9aO70228 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.25■□□□□ 0.67
Atp9aO70228 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atp9aO70228 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp9aO70228 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Atp9aO70228 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp9aO70228 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atp9aO70228 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.24■□□□□ 0.67
Atp9aO70228 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atp9aO70228 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Atp9aO70228 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atp9aO70228 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atp9aO70228 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atp9aO70228 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atp9aO70228 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Atp9aO70228 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.24■□□□□ 0.67
Atp9aO70228 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atp9aO70228 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms