Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp8O70138 Gm7638-201ENSMUST00000121348 967 ntBASIC21.26■□□□□ 0.99
Mmp8O70138 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Mmp8O70138 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC21.26■□□□□ 0.99
Mmp8O70138 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp8O70138 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp8O70138 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Mmp8O70138 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Mmp8O70138 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Mmp8O70138 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp8O70138 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Mmp8O70138 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp8O70138 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp8O70138 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC21.25■□□□□ 0.99
Mmp8O70138 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp8O70138 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp8O70138 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp8O70138 Gm17661-201ENSMUST00000170317 270 ntBASIC21.25■□□□□ 0.99
Mmp8O70138 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC21.25■□□□□ 0.99
Mmp8O70138 Gm37025-201ENSMUST00000195159 829 ntBASIC21.25■□□□□ 0.99
Mmp8O70138 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp8O70138 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp8O70138 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp8O70138 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC21.25■□□□□ 0.99
Mmp8O70138 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp8O70138 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp8O70138 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp8O70138 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp8O70138 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp8O70138 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Mmp8O70138 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp8O70138 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Mmp8O70138 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Mmp8O70138 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp8O70138 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp8O70138 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp8O70138 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.24■□□□□ 0.99
Mmp8O70138 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.24■□□□□ 0.99
Mmp8O70138 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp8O70138 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp8O70138 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp8O70138 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Mmp8O70138 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC21.23■□□□□ 0.99
Mmp8O70138 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mmp8O70138 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mmp8O70138 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mmp8O70138 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mmp8O70138 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mmp8O70138 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.23■□□□□ 0.99
Mmp8O70138 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mmp8O70138 Gm5417-201ENSMUST00000079706 384 ntBASIC21.23■□□□□ 0.99
Mmp8O70138 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Mmp8O70138 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mmp8O70138 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mmp8O70138 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Mmp8O70138 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Mmp8O70138 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp8O70138 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.22■□□□□ 0.99
Mmp8O70138 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp8O70138 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp8O70138 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp8O70138 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp8O70138 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp8O70138 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp8O70138 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp8O70138 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Mmp8O70138 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp8O70138 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp8O70138 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp8O70138 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp8O70138 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.21■□□□□ 0.99
Mmp8O70138 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp8O70138 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp8O70138 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.21■□□□□ 0.99
Mmp8O70138 Gm9731-201ENSMUST00000209480 747 ntBASIC21.21■□□□□ 0.99
Mmp8O70138 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.21■□□□□ 0.99
Mmp8O70138 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC21.21■□□□□ 0.99
Mmp8O70138 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp8O70138 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp8O70138 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp8O70138 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp8O70138 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp8O70138 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp8O70138 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp8O70138 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp8O70138 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp8O70138 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mmp8O70138 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.2■□□□□ 0.98
Mmp8O70138 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Mmp8O70138 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mmp8O70138 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Mmp8O70138 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.2■□□□□ 0.98
Mmp8O70138 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Mmp8O70138 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC21.2■□□□□ 0.98
Mmp8O70138 Gm6598-201ENSMUST00000202719 2615 ntBASIC21.2■□□□□ 0.98
Mmp8O70138 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mmp8O70138 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Mmp8O70138 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mmp8O70138 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mmp8O70138 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms