Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1bO55017 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.78■□□□□ 0.28
Cacna1bO55017 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cacna1bO55017 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.78■□□□□ 0.28
Cacna1bO55017 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1bO55017 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1bO55017 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cacna1bO55017 Gm6623-201ENSMUST00000173570 544 ntBASIC16.78■□□□□ 0.28
Cacna1bO55017 Gm37722-201ENSMUST00000193757 208 ntBASIC16.78■□□□□ 0.28
Cacna1bO55017 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1bO55017 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.78■□□□□ 0.28
Cacna1bO55017 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1bO55017 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1bO55017 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.78■□□□□ 0.28
Cacna1bO55017 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1bO55017 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1bO55017 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.78■□□□□ 0.28
Cacna1bO55017 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1bO55017 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1bO55017 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cacna1bO55017 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cacna1bO55017 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Cacna1bO55017 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.77■□□□□ 0.28
Cacna1bO55017 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.77■□□□□ 0.28
Cacna1bO55017 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Cacna1bO55017 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Cacna1bO55017 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
Cacna1bO55017 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
Cacna1bO55017 AW822252-206ENSMUST00000208904 237 ntBASIC16.77■□□□□ 0.28
Cacna1bO55017 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.77■□□□□ 0.28
Cacna1bO55017 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cacna1bO55017 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cacna1bO55017 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cacna1bO55017 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.77■□□□□ 0.27
Cacna1bO55017 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cacna1bO55017 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cacna1bO55017 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Cacna1bO55017 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.76■□□□□ 0.27
Cacna1bO55017 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.76■□□□□ 0.27
Cacna1bO55017 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1bO55017 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.76■□□□□ 0.27
Cacna1bO55017 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cacna1bO55017 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1bO55017 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1bO55017 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1bO55017 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1bO55017 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1bO55017 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1bO55017 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Cacna1bO55017 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cacna1bO55017 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1bO55017 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Cacna1bO55017 Gm15794-201ENSMUST00000120182 631 ntBASIC16.75■□□□□ 0.27
Cacna1bO55017 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1bO55017 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.75■□□□□ 0.27
Cacna1bO55017 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1bO55017 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1bO55017 Fst-202ENSMUST00000223640 2612 ntBASIC16.75■□□□□ 0.27
Cacna1bO55017 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1bO55017 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1bO55017 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cacna1bO55017 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cacna1bO55017 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.75■□□□□ 0.27
Cacna1bO55017 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.75■□□□□ 0.27
Cacna1bO55017 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1bO55017 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1bO55017 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1bO55017 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cacna1bO55017 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1bO55017 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1bO55017 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Cacna1bO55017 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1bO55017 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.74■□□□□ 0.27
Cacna1bO55017 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1bO55017 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cacna1bO55017 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1bO55017 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1bO55017 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1bO55017 Gm27525-201ENSMUST00000184465 107 ntBASIC16.74■□□□□ 0.27
Cacna1bO55017 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.74■□□□□ 0.27
Cacna1bO55017 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.74■□□□□ 0.27
Cacna1bO55017 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1bO55017 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1bO55017 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cacna1bO55017 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1bO55017 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1bO55017 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1bO55017 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1bO55017 Tgds-204ENSMUST00000228543 1594 ntBASIC16.73■□□□□ 0.27
Cacna1bO55017 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Cacna1bO55017 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cacna1bO55017 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1bO55017 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cacna1bO55017 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.73■□□□□ 0.27
Cacna1bO55017 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1bO55017 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1bO55017 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.73■□□□□ 0.27
Cacna1bO55017 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1bO55017 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cacna1bO55017 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms