Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Kcnu1O54982 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.57■□□□□ 0.56
Kcnu1O54982 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Kcnu1O54982 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Kcnu1O54982 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Kcnu1O54982 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Kcnu1O54982 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Kcnu1O54982 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.56■□□□□ 0.56
Kcnu1O54982 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.56■□□□□ 0.56
Kcnu1O54982 Gm37856-201ENSMUST00000191634 999 ntBASIC18.56■□□□□ 0.56
Kcnu1O54982 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.56■□□□□ 0.56
Kcnu1O54982 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Kcnu1O54982 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Kcnu1O54982 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.56■□□□□ 0.56
Kcnu1O54982 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.56■□□□□ 0.56
Kcnu1O54982 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Kcnu1O54982 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Kcnu1O54982 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Kcnu1O54982 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Kcnu1O54982 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Kcnu1O54982 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Kcnu1O54982 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Kcnu1O54982 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Kcnu1O54982 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Kcnu1O54982 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Kcnu1O54982 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Kcnu1O54982 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Kcnu1O54982 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
Kcnu1O54982 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.55■□□□□ 0.56
Kcnu1O54982 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Kcnu1O54982 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Kcnu1O54982 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Kcnu1O54982 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Kcnu1O54982 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Kcnu1O54982 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.54■□□□□ 0.56
Kcnu1O54982 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Kcnu1O54982 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.54■□□□□ 0.56
Kcnu1O54982 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Kcnu1O54982 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Kcnu1O54982 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.54■□□□□ 0.56
Kcnu1O54982 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Kcnu1O54982 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Kcnu1O54982 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Kcnu1O54982 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Kcnu1O54982 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Kcnu1O54982 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Kcnu1O54982 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Kcnu1O54982 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Kcnu1O54982 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.53■□□□□ 0.56
Kcnu1O54982 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Kcnu1O54982 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Kcnu1O54982 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Kcnu1O54982 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Kcnu1O54982 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Kcnu1O54982 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Kcnu1O54982 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Kcnu1O54982 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.52■□□□□ 0.56
Kcnu1O54982 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Kcnu1O54982 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Kcnu1O54982 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.52■□□□□ 0.56
Kcnu1O54982 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Kcnu1O54982 Gm37292-201ENSMUST00000192062 758 ntBASIC18.52■□□□□ 0.56
Kcnu1O54982 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Kcnu1O54982 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Kcnu1O54982 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.52■□□□□ 0.55
Kcnu1O54982 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Kcnu1O54982 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Kcnu1O54982 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Kcnu1O54982 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Kcnu1O54982 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Kcnu1O54982 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.52■□□□□ 0.55
Kcnu1O54982 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Kcnu1O54982 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Kcnu1O54982 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kcnu1O54982 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kcnu1O54982 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kcnu1O54982 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Kcnu1O54982 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Kcnu1O54982 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Kcnu1O54982 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kcnu1O54982 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kcnu1O54982 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Kcnu1O54982 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kcnu1O54982 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.51■□□□□ 0.55
Kcnu1O54982 Trmt13-210ENSMUST00000198454 880 ntBASIC18.51■□□□□ 0.55
Kcnu1O54982 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.51■□□□□ 0.55
Kcnu1O54982 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Kcnu1O54982 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kcnu1O54982 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kcnu1O54982 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kcnu1O54982 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kcnu1O54982 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Kcnu1O54982 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Kcnu1O54982 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Kcnu1O54982 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Kcnu1O54982 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Kcnu1O54982 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Kcnu1O54982 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Kcnu1O54982 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Kcnu1O54982 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms