Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf2O35218 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf2O35218 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf2O35218 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf2O35218 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cpsf2O35218 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf2O35218 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf2O35218 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.63■□□□□ 0.57
Cpsf2O35218 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf2O35218 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf2O35218 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cpsf2O35218 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf2O35218 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf2O35218 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cpsf2O35218 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf2O35218 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.62■□□□□ 0.57
Cpsf2O35218 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf2O35218 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf2O35218 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf2O35218 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf2O35218 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.62■□□□□ 0.57
Cpsf2O35218 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf2O35218 Rab3c-203ENSMUST00000224180 967 ntBASIC18.62■□□□□ 0.57
Cpsf2O35218 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf2O35218 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cpsf2O35218 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf2O35218 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cpsf2O35218 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf2O35218 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf2O35218 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf2O35218 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf2O35218 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf2O35218 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.61■□□□□ 0.57
Cpsf2O35218 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf2O35218 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf2O35218 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf2O35218 Flg-201ENSMUST00000050758 1488 ntBASIC18.61■□□□□ 0.57
Cpsf2O35218 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf2O35218 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.61■□□□□ 0.57
Cpsf2O35218 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf2O35218 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf2O35218 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf2O35218 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf2O35218 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf2O35218 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Cpsf2O35218 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf2O35218 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf2O35218 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.6■□□□□ 0.57
Cpsf2O35218 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf2O35218 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf2O35218 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.6■□□□□ 0.57
Cpsf2O35218 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf2O35218 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf2O35218 Gm29791-202ENSMUST00000207888 369 ntBASIC18.6■□□□□ 0.57
Cpsf2O35218 Mtag2-201ENSMUST00000058665 714 ntBASIC18.6■□□□□ 0.57
Cpsf2O35218 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf2O35218 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf2O35218 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf2O35218 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf2O35218 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf2O35218 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cpsf2O35218 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf2O35218 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf2O35218 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf2O35218 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cpsf2O35218 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf2O35218 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Cpsf2O35218 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf2O35218 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf2O35218 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cpsf2O35218 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf2O35218 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf2O35218 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf2O35218 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf2O35218 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf2O35218 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.59■□□□□ 0.57
Cpsf2O35218 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf2O35218 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf2O35218 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf2O35218 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf2O35218 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf2O35218 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf2O35218 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.59■□□□□ 0.57
Cpsf2O35218 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cpsf2O35218 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf2O35218 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf2O35218 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf2O35218 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.59■□□□□ 0.57
Cpsf2O35218 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.58■□□□□ 0.57
Cpsf2O35218 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cpsf2O35218 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Cpsf2O35218 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cpsf2O35218 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.58■□□□□ 0.57
Cpsf2O35218 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cpsf2O35218 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.58■□□□□ 0.57
Cpsf2O35218 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Cpsf2O35218 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf2O35218 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf2O35218 Gm11927-201ENSMUST00000118472 759 ntBASIC18.58■□□□□ 0.56
Cpsf2O35218 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms