Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trove2O08848 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trove2O08848 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.88■□□□□ 0.45
Trove2O08848 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trove2O08848 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trove2O08848 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trove2O08848 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trove2O08848 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trove2O08848 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trove2O08848 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trove2O08848 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trove2O08848 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trove2O08848 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trove2O08848 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trove2O08848 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trove2O08848 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trove2O08848 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trove2O08848 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trove2O08848 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trove2O08848 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trove2O08848 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trove2O08848 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trove2O08848 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trove2O08848 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trove2O08848 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trove2O08848 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.87■□□□□ 0.45
Trove2O08848 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trove2O08848 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trove2O08848 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trove2O08848 Gm42569-201ENSMUST00000200539 472 ntBASIC17.87■□□□□ 0.45
Trove2O08848 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.87■□□□□ 0.45
Trove2O08848 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trove2O08848 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.87■□□□□ 0.45
Trove2O08848 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.87■□□□□ 0.45
Trove2O08848 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trove2O08848 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Trove2O08848 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Trove2O08848 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.87■□□□□ 0.45
Trove2O08848 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trove2O08848 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.86■□□□□ 0.45
Trove2O08848 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trove2O08848 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trove2O08848 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trove2O08848 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.86■□□□□ 0.45
Trove2O08848 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trove2O08848 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trove2O08848 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trove2O08848 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trove2O08848 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trove2O08848 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trove2O08848 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trove2O08848 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trove2O08848 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trove2O08848 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trove2O08848 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trove2O08848 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trove2O08848 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trove2O08848 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trove2O08848 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.85■□□□□ 0.45
Trove2O08848 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trove2O08848 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trove2O08848 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.85■□□□□ 0.45
Trove2O08848 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trove2O08848 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trove2O08848 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.85■□□□□ 0.45
Trove2O08848 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trove2O08848 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trove2O08848 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trove2O08848 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trove2O08848 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trove2O08848 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Trove2O08848 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trove2O08848 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trove2O08848 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trove2O08848 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trove2O08848 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trove2O08848 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trove2O08848 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trove2O08848 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trove2O08848 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trove2O08848 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trove2O08848 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trove2O08848 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trove2O08848 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trove2O08848 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trove2O08848 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trove2O08848 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trove2O08848 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trove2O08848 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.84■□□□□ 0.45
Trove2O08848 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Trove2O08848 Gm26571-201ENSMUST00000181399 666 ntBASIC17.84■□□□□ 0.45
Trove2O08848 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trove2O08848 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Trove2O08848 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trove2O08848 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trove2O08848 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.84■□□□□ 0.45
Trove2O08848 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trove2O08848 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trove2O08848 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
Trove2O08848 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms