Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim34bJ3QNR8 Iqck-206ENSMUST00000208658 2891 ntBASIC21.34■■□□□ 1.01
Trim34bJ3QNR8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Trim34bJ3QNR8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim34bJ3QNR8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim34bJ3QNR8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trim34bJ3QNR8 Gm43272-201ENSMUST00000200599 1584 ntBASIC21.33■■□□□ 1.01
Trim34bJ3QNR8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim34bJ3QNR8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim34bJ3QNR8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim34bJ3QNR8 Mir1668-201ENSMUST00000184114 107 ntBASIC21.33■■□□□ 1.01
Trim34bJ3QNR8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC21.33■■□□□ 1.01
Trim34bJ3QNR8 Gm21559-201ENSMUST00000220638 855 ntBASIC21.33■■□□□ 1.01
Trim34bJ3QNR8 Gm8587-201ENSMUST00000076538 843 ntBASIC21.33■■□□□ 1.01
Trim34bJ3QNR8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim34bJ3QNR8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trim34bJ3QNR8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Trim34bJ3QNR8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Trim34bJ3QNR8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Trim34bJ3QNR8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim34bJ3QNR8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim34bJ3QNR8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.32■■□□□ 1
Trim34bJ3QNR8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim34bJ3QNR8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim34bJ3QNR8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim34bJ3QNR8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Trim34bJ3QNR8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC21.32■■□□□ 1
Trim34bJ3QNR8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Trim34bJ3QNR8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim34bJ3QNR8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC21.32■■□□□ 1
Trim34bJ3QNR8 Gm7213-201ENSMUST00000215977 950 ntBASIC21.32■■□□□ 1
Trim34bJ3QNR8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim34bJ3QNR8 Gm10819-201ENSMUST00000099988 561 ntBASIC21.32■■□□□ 1
Trim34bJ3QNR8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Trim34bJ3QNR8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Trim34bJ3QNR8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
Trim34bJ3QNR8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC21.31■■□□□ 1
Trim34bJ3QNR8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim34bJ3QNR8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim34bJ3QNR8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Trim34bJ3QNR8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.31■■□□□ 1
Trim34bJ3QNR8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim34bJ3QNR8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim34bJ3QNR8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC21.31■■□□□ 1
Trim34bJ3QNR8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim34bJ3QNR8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim34bJ3QNR8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Trim34bJ3QNR8 Gm25016-201ENSMUST00000158399 131 ntBASIC21.31■■□□□ 1
Trim34bJ3QNR8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Trim34bJ3QNR8 Gm33142-201ENSMUST00000193913 867 ntBASIC21.31■■□□□ 1
Trim34bJ3QNR8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim34bJ3QNR8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC21.31■■□□□ 1
Trim34bJ3QNR8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC21.31■■□□□ 1
Trim34bJ3QNR8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC21.31■■□□□ 1
Trim34bJ3QNR8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim34bJ3QNR8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim34bJ3QNR8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim34bJ3QNR8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim34bJ3QNR8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Trim34bJ3QNR8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim34bJ3QNR8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim34bJ3QNR8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim34bJ3QNR8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim34bJ3QNR8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim34bJ3QNR8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC21.3■■□□□ 1
Trim34bJ3QNR8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Trim34bJ3QNR8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.3■■□□□ 1
Trim34bJ3QNR8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim34bJ3QNR8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Trim34bJ3QNR8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim34bJ3QNR8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Trim34bJ3QNR8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
Trim34bJ3QNR8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim34bJ3QNR8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Trim34bJ3QNR8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trim34bJ3QNR8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim34bJ3QNR8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC21.29■■□□□ 1
Trim34bJ3QNR8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC21.29■■□□□ 1
Trim34bJ3QNR8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC21.29■■□□□ 1
Trim34bJ3QNR8 Gm10459-201ENSMUST00000202708 1155 ntBASIC21.29■■□□□ 1
Trim34bJ3QNR8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC21.29■■□□□ 1
Trim34bJ3QNR8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim34bJ3QNR8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Trim34bJ3QNR8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC21.29■■□□□ 1
Trim34bJ3QNR8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Trim34bJ3QNR8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim34bJ3QNR8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim34bJ3QNR8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim34bJ3QNR8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim34bJ3QNR8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Trim34bJ3QNR8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim34bJ3QNR8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim34bJ3QNR8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim34bJ3QNR8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim34bJ3QNR8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim34bJ3QNR8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim34bJ3QNR8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim34bJ3QNR8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Trim34bJ3QNR8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Trim34bJ3QNR8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms