Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Sgo2bJ3QMK1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Sgo2bJ3QMK1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Sgo2bJ3QMK1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Sgo2bJ3QMK1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sgo2bJ3QMK1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sgo2bJ3QMK1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sgo2bJ3QMK1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sgo2bJ3QMK1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sgo2bJ3QMK1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sgo2bJ3QMK1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Sgo2bJ3QMK1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sgo2bJ3QMK1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sgo2bJ3QMK1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sgo2bJ3QMK1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sgo2bJ3QMK1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Sgo2bJ3QMK1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sgo2bJ3QMK1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.37■□□□□ 0.37
Sgo2bJ3QMK1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sgo2bJ3QMK1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sgo2bJ3QMK1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sgo2bJ3QMK1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Sgo2bJ3QMK1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sgo2bJ3QMK1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sgo2bJ3QMK1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sgo2bJ3QMK1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sgo2bJ3QMK1 Gm37856-201ENSMUST00000191634 999 ntBASIC17.36■□□□□ 0.37
Sgo2bJ3QMK1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sgo2bJ3QMK1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sgo2bJ3QMK1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sgo2bJ3QMK1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Sgo2bJ3QMK1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sgo2bJ3QMK1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.36■□□□□ 0.37
Sgo2bJ3QMK1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sgo2bJ3QMK1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sgo2bJ3QMK1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sgo2bJ3QMK1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sgo2bJ3QMK1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sgo2bJ3QMK1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sgo2bJ3QMK1 Gm6576-201ENSMUST00000169678 883 ntBASIC17.35■□□□□ 0.37
Sgo2bJ3QMK1 Gm27011-201ENSMUST00000182352 972 ntBASIC17.35■□□□□ 0.37
Sgo2bJ3QMK1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Sgo2bJ3QMK1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sgo2bJ3QMK1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sgo2bJ3QMK1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.35■□□□□ 0.37
Sgo2bJ3QMK1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sgo2bJ3QMK1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sgo2bJ3QMK1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sgo2bJ3QMK1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sgo2bJ3QMK1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sgo2bJ3QMK1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sgo2bJ3QMK1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Sgo2bJ3QMK1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sgo2bJ3QMK1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sgo2bJ3QMK1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sgo2bJ3QMK1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sgo2bJ3QMK1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sgo2bJ3QMK1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sgo2bJ3QMK1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sgo2bJ3QMK1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sgo2bJ3QMK1 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.34■□□□□ 0.37
Sgo2bJ3QMK1 Gm18025-201ENSMUST00000221733 862 ntBASIC17.34■□□□□ 0.37
Sgo2bJ3QMK1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sgo2bJ3QMK1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sgo2bJ3QMK1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sgo2bJ3QMK1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sgo2bJ3QMK1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sgo2bJ3QMK1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sgo2bJ3QMK1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sgo2bJ3QMK1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sgo2bJ3QMK1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sgo2bJ3QMK1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.34■□□□□ 0.37
Sgo2bJ3QMK1 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.34■□□□□ 0.37
Sgo2bJ3QMK1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sgo2bJ3QMK1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Sgo2bJ3QMK1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Sgo2bJ3QMK1 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms