Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.9■□□□□ 0.94
NpcdF8VQB8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NpcdF8VQB8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC20.9■□□□□ 0.94
NpcdF8VQB8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NpcdF8VQB8 Gm13401-201ENSMUST00000117074 291 ntBASIC20.9■□□□□ 0.94
NpcdF8VQB8 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NpcdF8VQB8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NpcdF8VQB8 Gm43347-201ENSMUST00000200226 580 ntBASIC20.9■□□□□ 0.94
NpcdF8VQB8 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.9■□□□□ 0.94
NpcdF8VQB8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
NpcdF8VQB8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
NpcdF8VQB8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NpcdF8VQB8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NpcdF8VQB8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NpcdF8VQB8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NpcdF8VQB8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
NpcdF8VQB8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.89■□□□□ 0.93
NpcdF8VQB8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NpcdF8VQB8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NpcdF8VQB8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NpcdF8VQB8 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NpcdF8VQB8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.89■□□□□ 0.93
NpcdF8VQB8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NpcdF8VQB8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NpcdF8VQB8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NpcdF8VQB8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NpcdF8VQB8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
NpcdF8VQB8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NpcdF8VQB8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NpcdF8VQB8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NpcdF8VQB8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NpcdF8VQB8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.88■□□□□ 0.93
NpcdF8VQB8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
NpcdF8VQB8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NpcdF8VQB8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NpcdF8VQB8 Gm37722-201ENSMUST00000193757 208 ntBASIC20.88■□□□□ 0.93
NpcdF8VQB8 Gm37025-201ENSMUST00000195159 829 ntBASIC20.88■□□□□ 0.93
NpcdF8VQB8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.88■□□□□ 0.93
NpcdF8VQB8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NpcdF8VQB8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NpcdF8VQB8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NpcdF8VQB8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NpcdF8VQB8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NpcdF8VQB8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NpcdF8VQB8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NpcdF8VQB8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NpcdF8VQB8 Gm10418-201ENSMUST00000100943 576 ntBASIC20.87■□□□□ 0.93
NpcdF8VQB8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NpcdF8VQB8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NpcdF8VQB8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NpcdF8VQB8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NpcdF8VQB8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NpcdF8VQB8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
NpcdF8VQB8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
NpcdF8VQB8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NpcdF8VQB8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.87■□□□□ 0.93
NpcdF8VQB8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NpcdF8VQB8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NpcdF8VQB8 BC021767-201ENSMUST00000126387 1716 ntBASIC20.87■□□□□ 0.93
NpcdF8VQB8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
NpcdF8VQB8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NpcdF8VQB8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NpcdF8VQB8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NpcdF8VQB8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NpcdF8VQB8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NpcdF8VQB8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NpcdF8VQB8 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NpcdF8VQB8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NpcdF8VQB8 Gm27525-201ENSMUST00000184465 107 ntBASIC20.86■□□□□ 0.93
NpcdF8VQB8 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NpcdF8VQB8 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC20.86■□□□□ 0.93
NpcdF8VQB8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NpcdF8VQB8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NpcdF8VQB8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NpcdF8VQB8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
NpcdF8VQB8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.86■□□□□ 0.93
NpcdF8VQB8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.86■□□□□ 0.93
NpcdF8VQB8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NpcdF8VQB8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NpcdF8VQB8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NpcdF8VQB8 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.85■□□□□ 0.93
NpcdF8VQB8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.85■□□□□ 0.93
NpcdF8VQB8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NpcdF8VQB8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NpcdF8VQB8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NpcdF8VQB8 Gm18206-201ENSMUST00000207027 926 ntBASIC20.85■□□□□ 0.93
NpcdF8VQB8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NpcdF8VQB8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NpcdF8VQB8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NpcdF8VQB8 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
NpcdF8VQB8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
NpcdF8VQB8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NpcdF8VQB8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NpcdF8VQB8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NpcdF8VQB8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.85■□□□□ 0.93
NpcdF8VQB8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NpcdF8VQB8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NpcdF8VQB8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NpcdF8VQB8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NpcdF8VQB8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms