Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.52■□□□□ 0.39
Col6a3E9PWQ3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.52■□□□□ 0.39
Col6a3E9PWQ3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Col6a3E9PWQ3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.51■□□□□ 0.39
Col6a3E9PWQ3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col6a3E9PWQ3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Col6a3E9PWQ3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Col6a3E9PWQ3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col6a3E9PWQ3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col6a3E9PWQ3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col6a3E9PWQ3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Col6a3E9PWQ3 Gm11424-201ENSMUST00000121929 829 ntBASIC17.51■□□□□ 0.39
Col6a3E9PWQ3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col6a3E9PWQ3 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.51■□□□□ 0.39
Col6a3E9PWQ3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col6a3E9PWQ3 Gm4535-201ENSMUST00000182274 558 ntBASIC17.51■□□□□ 0.39
Col6a3E9PWQ3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.51■□□□□ 0.39
Col6a3E9PWQ3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col6a3E9PWQ3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col6a3E9PWQ3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col6a3E9PWQ3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col6a3E9PWQ3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col6a3E9PWQ3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col6a3E9PWQ3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col6a3E9PWQ3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Col6a3E9PWQ3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Col6a3E9PWQ3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col6a3E9PWQ3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Col6a3E9PWQ3 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.5■□□□□ 0.39
Col6a3E9PWQ3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col6a3E9PWQ3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col6a3E9PWQ3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col6a3E9PWQ3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col6a3E9PWQ3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col6a3E9PWQ3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.5■□□□□ 0.39
Col6a3E9PWQ3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col6a3E9PWQ3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col6a3E9PWQ3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col6a3E9PWQ3 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.5■□□□□ 0.39
Col6a3E9PWQ3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.5■□□□□ 0.39
Col6a3E9PWQ3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col6a3E9PWQ3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col6a3E9PWQ3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.5■□□□□ 0.39
Col6a3E9PWQ3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col6a3E9PWQ3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.5■□□□□ 0.39
Col6a3E9PWQ3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col6a3E9PWQ3 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.5■□□□□ 0.39
Col6a3E9PWQ3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col6a3E9PWQ3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Col6a3E9PWQ3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col6a3E9PWQ3 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col6a3E9PWQ3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Col6a3E9PWQ3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Col6a3E9PWQ3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col6a3E9PWQ3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Col6a3E9PWQ3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Col6a3E9PWQ3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col6a3E9PWQ3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Col6a3E9PWQ3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col6a3E9PWQ3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col6a3E9PWQ3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Col6a3E9PWQ3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 Golph3-205ENSMUST00000228671 2842 ntBASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 Gm27867-201ENSMUST00000184778 125 ntBASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Col6a3E9PWQ3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col6a3E9PWQ3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col6a3E9PWQ3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Col6a3E9PWQ3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col6a3E9PWQ3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Col6a3E9PWQ3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col6a3E9PWQ3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col6a3E9PWQ3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col6a3E9PWQ3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col6a3E9PWQ3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col6a3E9PWQ3 Gm24841-201ENSMUST00000158676 357 ntBASIC17.46■□□□□ 0.39
Col6a3E9PWQ3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col6a3E9PWQ3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.46■□□□□ 0.39
Col6a3E9PWQ3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col6a3E9PWQ3 Mir3113-201ENSMUST00000175478 76 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms