Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.74■□□□□ 0.59
Ptchd4B9EKX1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.74■□□□□ 0.59
Ptchd4B9EKX1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ptchd4B9EKX1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ptchd4B9EKX1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ptchd4B9EKX1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ptchd4B9EKX1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ptchd4B9EKX1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ptchd4B9EKX1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ptchd4B9EKX1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ptchd4B9EKX1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ptchd4B9EKX1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ptchd4B9EKX1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ptchd4B9EKX1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ptchd4B9EKX1 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.73■□□□□ 0.59
Ptchd4B9EKX1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.73■□□□□ 0.59
Ptchd4B9EKX1 Gm5587-201ENSMUST00000206270 674 ntBASIC18.73■□□□□ 0.59
Ptchd4B9EKX1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ptchd4B9EKX1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ptchd4B9EKX1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ptchd4B9EKX1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ptchd4B9EKX1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ptchd4B9EKX1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ptchd4B9EKX1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ptchd4B9EKX1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ptchd4B9EKX1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ptchd4B9EKX1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ptchd4B9EKX1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ptchd4B9EKX1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Ptchd4B9EKX1 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.72■□□□□ 0.59
Ptchd4B9EKX1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ptchd4B9EKX1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ptchd4B9EKX1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.72■□□□□ 0.59
Ptchd4B9EKX1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ptchd4B9EKX1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ptchd4B9EKX1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ptchd4B9EKX1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ptchd4B9EKX1 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.71■□□□□ 0.59
Ptchd4B9EKX1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ptchd4B9EKX1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ptchd4B9EKX1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ptchd4B9EKX1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ptchd4B9EKX1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.71■□□□□ 0.59
Ptchd4B9EKX1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ptchd4B9EKX1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ptchd4B9EKX1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ptchd4B9EKX1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.71■□□□□ 0.59
Ptchd4B9EKX1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ptchd4B9EKX1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ptchd4B9EKX1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ptchd4B9EKX1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ptchd4B9EKX1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ptchd4B9EKX1 Gm14859-201ENSMUST00000117752 357 ntBASIC18.7■□□□□ 0.58
Ptchd4B9EKX1 Gm9013-201ENSMUST00000132939 882 ntBASIC18.7■□□□□ 0.58
Ptchd4B9EKX1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ptchd4B9EKX1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ptchd4B9EKX1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
Ptchd4B9EKX1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ptchd4B9EKX1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.7■□□□□ 0.58
Ptchd4B9EKX1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ptchd4B9EKX1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ptchd4B9EKX1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Ptchd4B9EKX1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ptchd4B9EKX1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ptchd4B9EKX1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Ptchd4B9EKX1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.69■□□□□ 0.58
Ptchd4B9EKX1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ptchd4B9EKX1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ptchd4B9EKX1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ptchd4B9EKX1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Ptchd4B9EKX1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ptchd4B9EKX1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ptchd4B9EKX1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ptchd4B9EKX1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ptchd4B9EKX1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ptchd4B9EKX1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ptchd4B9EKX1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.68■□□□□ 0.58
Ptchd4B9EKX1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptchd4B9EKX1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptchd4B9EKX1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptchd4B9EKX1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.68■□□□□ 0.58
Ptchd4B9EKX1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ptchd4B9EKX1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ptchd4B9EKX1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptchd4B9EKX1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ptchd4B9EKX1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptchd4B9EKX1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptchd4B9EKX1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ptchd4B9EKX1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptchd4B9EKX1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptchd4B9EKX1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Ptchd4B9EKX1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ptchd4B9EKX1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Ptchd4B9EKX1 Gm7284-201ENSMUST00000131667 944 ntBASIC18.67■□□□□ 0.58
Ptchd4B9EKX1 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.67■□□□□ 0.58
Ptchd4B9EKX1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ptchd4B9EKX1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ptchd4B9EKX1 Gm10566-201ENSMUST00000086739 996 ntBASIC18.67■□□□□ 0.58
Ptchd4B9EKX1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ptchd4B9EKX1 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms