Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm5640A3KG49 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
Gm5640A3KG49 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm5640A3KG49 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Gm5640A3KG49 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gm5640A3KG49 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm5640A3KG49 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm5640A3KG49 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm5640A3KG49 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Gm5640A3KG49 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm5640A3KG49 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm5640A3KG49 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gm5640A3KG49 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Gm5640A3KG49 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Gm5640A3KG49 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5640A3KG49 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Gm5640A3KG49 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5640A3KG49 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.7■□□□□ 0.42
Gm5640A3KG49 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5640A3KG49 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Gm5640A3KG49 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5640A3KG49 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5640A3KG49 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5640A3KG49 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5640A3KG49 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5640A3KG49 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5640A3KG49 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5640A3KG49 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5640A3KG49 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5640A3KG49 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.7■□□□□ 0.42
Gm5640A3KG49 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm5640A3KG49 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Gm5640A3KG49 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5640A3KG49 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5640A3KG49 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Gm5640A3KG49 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5640A3KG49 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5640A3KG49 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5640A3KG49 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5640A3KG49 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5640A3KG49 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Gm5640A3KG49 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5640A3KG49 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5640A3KG49 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5640A3KG49 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5640A3KG49 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm5640A3KG49 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5640A3KG49 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5640A3KG49 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5640A3KG49 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5640A3KG49 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5640A3KG49 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5640A3KG49 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Gm5640A3KG49 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5640A3KG49 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5640A3KG49 Gm12821-201ENSMUST00000120022 600 ntBASIC17.68■□□□□ 0.42
Gm5640A3KG49 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5640A3KG49 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.68■□□□□ 0.42
Gm5640A3KG49 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5640A3KG49 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Gm5640A3KG49 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5640A3KG49 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5640A3KG49 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.68■□□□□ 0.42
Gm5640A3KG49 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5640A3KG49 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5640A3KG49 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm5640A3KG49 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Gm5640A3KG49 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.67■□□□□ 0.42
Gm5640A3KG49 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5640A3KG49 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Gm5640A3KG49 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5640A3KG49 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5640A3KG49 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Gm5640A3KG49 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5640A3KG49 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5640A3KG49 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5640A3KG49 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5640A3KG49 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.67■□□□□ 0.42
Gm5640A3KG49 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5640A3KG49 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5640A3KG49 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5640A3KG49 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.67■□□□□ 0.42
Gm5640A3KG49 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5640A3KG49 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5640A3KG49 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5640A3KG49 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5640A3KG49 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5640A3KG49 Dancr-204ENSMUST00000132389 2347 ntBASIC17.67■□□□□ 0.42
Gm5640A3KG49 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5640A3KG49 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5640A3KG49 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5640A3KG49 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Gm5640A3KG49 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Gm5640A3KG49 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5640A3KG49 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5640A3KG49 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm5640A3KG49 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5640A3KG49 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5640A3KG49 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5640A3KG49 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms