Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav12-1A0N8R1 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav12-1A0N8R1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav12-1A0N8R1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12-1A0N8R1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12-1A0N8R1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav12-1A0N8R1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav12-1A0N8R1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav12-1A0N8R1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12-1A0N8R1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12-1A0N8R1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Trav12-1A0N8R1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12-1A0N8R1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav12-1A0N8R1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.56□□□□□ -0.08
Trav12-1A0N8R1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav12-1A0N8R1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.56□□□□□ -0.08
Trav12-1A0N8R1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav12-1A0N8R1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.56□□□□□ -0.08
Trav12-1A0N8R1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12-1A0N8R1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav12-1A0N8R1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav12-1A0N8R1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12-1A0N8R1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12-1A0N8R1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12-1A0N8R1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12-1A0N8R1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.55□□□□□ -0.08
Trav12-1A0N8R1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trav12-1A0N8R1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12-1A0N8R1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12-1A0N8R1 Gm26524-201ENSMUST00000192339 390 ntBASIC14.55□□□□□ -0.08
Trav12-1A0N8R1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12-1A0N8R1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12-1A0N8R1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12-1A0N8R1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12-1A0N8R1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12-1A0N8R1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav12-1A0N8R1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav12-1A0N8R1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12-1A0N8R1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12-1A0N8R1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav12-1A0N8R1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav12-1A0N8R1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12-1A0N8R1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav12-1A0N8R1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12-1A0N8R1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12-1A0N8R1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12-1A0N8R1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav12-1A0N8R1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12-1A0N8R1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trav12-1A0N8R1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12-1A0N8R1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12-1A0N8R1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12-1A0N8R1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12-1A0N8R1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12-1A0N8R1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12-1A0N8R1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav12-1A0N8R1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-1A0N8R1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-1A0N8R1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-1A0N8R1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-1A0N8R1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-1A0N8R1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-1A0N8R1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav12-1A0N8R1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-1A0N8R1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-1A0N8R1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav12-1A0N8R1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-1A0N8R1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav12-1A0N8R1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-1A0N8R1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-1A0N8R1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-1A0N8R1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-1A0N8R1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav12-1A0N8R1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav12-1A0N8R1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav12-1A0N8R1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav12-1A0N8R1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms