Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Gm21168-201ENSMUST00000199646 1096 ntBASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Gm15635-204ENSMUST00000208024 2539 ntBASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Gm43548-201ENSMUST00000197139 2353 ntBASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv1-88A0A140T8N1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Igkv1-88A0A140T8N1 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Igkv1-88A0A140T8N1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Igkv1-88A0A140T8N1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Igkv1-88A0A140T8N1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Igkv1-88A0A140T8N1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Gm13146-201ENSMUST00000118508 780 ntBASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Gm13234-201ENSMUST00000120010 747 ntBASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Gm38345-201ENSMUST00000192635 1748 ntBASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Igkv1-88A0A140T8N1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Ddx41-204ENSMUST00000224765 2199 ntBASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Gm13534-201ENSMUST00000121169 513 ntBASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv1-88A0A140T8N1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms