Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Gm7514-201ENSMUST00000209475 934 ntBASIC12.02□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.02□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13d-4A0A0G2JFX3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-4A0A0G2JFX3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.01□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav13d-4A0A0G2JFX3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.01□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Gm10493-201ENSMUST00000097270 612 ntBASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav13d-4A0A0G2JFX3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms