Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13n-2A0A0G2JF93 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13n-2A0A0G2JF93 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 Gm45102-201ENSMUST00000207427 857 ntBASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13n-2A0A0G2JF93 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms