Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav13n-1A0A0G2JEU8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm18025-201ENSMUST00000221733 862 ntBASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm45906-201ENSMUST00000208911 1430 ntBASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm7856-201ENSMUST00000117514 1493 ntBASIC12.61□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm12382-201ENSMUST00000122005 922 ntBASIC12.61□□□□□ -0.39
Trav13n-1A0A0G2JEU8 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.61□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm42545-201ENSMUST00000202755 922 ntBASIC12.61□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Gm43183-201ENSMUST00000200632 547 ntBASIC12.6□□□□□ -0.39
Trav13n-1A0A0G2JEU8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav13n-1A0A0G2JEU8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms