Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Gm12441-201ENSMUST00000121806 588 ntBASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Gm27275-201ENSMUST00000184318 272 ntBASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.68□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.68□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.68□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Gm11249-201ENSMUST00000117071 859 ntBASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.66□□□□□ -0.38
Trav9n-2A0A0G2JDP3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Mir2861-201ENSMUST00000175539 82 ntBASIC12.66□□□□□ -0.38
Trav9n-2A0A0G2JDP3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9n-2A0A0G2JDP3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.66□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms