Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.09□□□□□ -0.31
Trav9-4A0A0B4J1K2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trav9-4A0A0B4J1K2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav9-4A0A0B4J1K2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-4A0A0B4J1K2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-4A0A0B4J1K2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-4A0A0B4J1K2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-4A0A0B4J1K2 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.07□□□□□ -0.32
Trav9-4A0A0B4J1K2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-4A0A0B4J1K2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav9-4A0A0B4J1K2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-4A0A0B4J1K2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-4A0A0B4J1K2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-4A0A0B4J1K2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-4A0A0B4J1K2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-4A0A0B4J1K2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-4A0A0B4J1K2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-4A0A0B4J1K2 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.07□□□□□ -0.32
Trav9-4A0A0B4J1K2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-4A0A0B4J1K2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav9-4A0A0B4J1K2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-4A0A0B4J1K2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav9-4A0A0B4J1K2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav9-4A0A0B4J1K2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav9-4A0A0B4J1K2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-4A0A0B4J1K2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-4A0A0B4J1K2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav9-4A0A0B4J1K2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Trav9-4A0A0B4J1K2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Trav9-4A0A0B4J1K2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-4A0A0B4J1K2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav9-4A0A0B4J1K2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-4A0A0B4J1K2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Trav9-4A0A0B4J1K2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-4A0A0B4J1K2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav9-4A0A0B4J1K2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-4A0A0B4J1K2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-4A0A0B4J1K2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav9-4A0A0B4J1K2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.06□□□□□ -0.32
Trav9-4A0A0B4J1K2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-4A0A0B4J1K2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.06□□□□□ -0.32
Trav9-4A0A0B4J1K2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-4A0A0B4J1K2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.06□□□□□ -0.32
Trav9-4A0A0B4J1K2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-4A0A0B4J1K2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-4A0A0B4J1K2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.05□□□□□ -0.32
Trav9-4A0A0B4J1K2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-4A0A0B4J1K2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-4A0A0B4J1K2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-4A0A0B4J1K2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-4A0A0B4J1K2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-4A0A0B4J1K2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-4A0A0B4J1K2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms