Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.55■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.54■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sirpb1aA0A0A6YYP6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sirpb1aA0A0A6YYP6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.54■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.54■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Gm29791-202ENSMUST00000207888 369 ntBASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Sirpb1aA0A0A6YYP6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.52■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.52■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Mir8112-201ENSMUST00000184382 131 ntBASIC16.52■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.52■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sirpb1aA0A0A6YYP6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Haglr-201ENSMUST00000100000 2085 ntBASIC16.52■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.51■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.5■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.5■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sirpb1aA0A0A6YYP6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms