Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Gm28033-201ENSMUST00000184224 96 ntBASIC14.45□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.45□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv3-4A0A0A6YXF1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.45□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Gm11950-201ENSMUST00000121615 838 ntBASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Gm18669-201ENSMUST00000216049 778 ntBASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ighv3-4A0A0A6YXF1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv3-4A0A0A6YXF1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.43□□□□□ -0.1
Ighv3-4A0A0A6YXF1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.43□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv3-4A0A0A6YXF1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.41□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ighv3-4A0A0A6YXF1 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms