Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.1□□□□□ -0.15
Trav6d-5A0A075B6B9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-5A0A075B6B9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-5A0A075B6B9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-5A0A075B6B9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-5A0A075B6B9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-5A0A075B6B9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-5A0A075B6B9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-5A0A075B6B9 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.1□□□□□ -0.15
Trav6d-5A0A075B6B9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-5A0A075B6B9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-5A0A075B6B9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-5A0A075B6B9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-5A0A075B6B9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-5A0A075B6B9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-5A0A075B6B9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-5A0A075B6B9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-5A0A075B6B9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Gm27454-201ENSMUST00000185090 204 ntBASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-5A0A075B6B9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6d-5A0A075B6B9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6d-5A0A075B6B9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6d-5A0A075B6B9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
Trav6d-5A0A075B6B9 Dancr-204ENSMUST00000132389 2347 ntBASIC14.08□□□□□ -0.16
Trav6d-5A0A075B6B9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-5A0A075B6B9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-5A0A075B6B9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-5A0A075B6B9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-5A0A075B6B9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav6d-5A0A075B6B9 Gm13234-201ENSMUST00000120010 747 ntBASIC14.08□□□□□ -0.16
Trav6d-5A0A075B6B9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-5A0A075B6B9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-5A0A075B6B9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-5A0A075B6B9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-5A0A075B6B9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-5A0A075B6B9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav6d-5A0A075B6B9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.08□□□□□ -0.16
Trav6d-5A0A075B6B9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav6d-5A0A075B6B9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-5A0A075B6B9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Trav6d-5A0A075B6B9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-5A0A075B6B9 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.07□□□□□ -0.16
Trav6d-5A0A075B6B9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-5A0A075B6B9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav6d-5A0A075B6B9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-5A0A075B6B9 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.07□□□□□ -0.16
Trav6d-5A0A075B6B9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-5A0A075B6B9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav6d-5A0A075B6B9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trav6d-5A0A075B6B9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Trav6d-5A0A075B6B9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-5A0A075B6B9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-5A0A075B6B9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-5A0A075B6B9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Trav6d-5A0A075B6B9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-5A0A075B6B9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-5A0A075B6B9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-5A0A075B6B9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-5A0A075B6B9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-5A0A075B6B9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-5A0A075B6B9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-5A0A075B6B9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.06□□□□□ -0.16
Trav6d-5A0A075B6B9 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.06□□□□□ -0.16
Trav6d-5A0A075B6B9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-5A0A075B6B9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav6d-5A0A075B6B9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-5A0A075B6B9 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.06□□□□□ -0.16
Trav6d-5A0A075B6B9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.06□□□□□ -0.16
Trav6d-5A0A075B6B9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-5A0A075B6B9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-5A0A075B6B9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-5A0A075B6B9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav6d-5A0A075B6B9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-5A0A075B6B9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav6d-5A0A075B6B9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6d-5A0A075B6B9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms