Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16A0A075B653 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16A0A075B653 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16A0A075B653 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16A0A075B653 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16A0A075B653 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16A0A075B653 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16A0A075B653 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16A0A075B653 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16A0A075B653 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16A0A075B653 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16A0A075B653 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav16A0A075B653 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav16A0A075B653 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav16A0A075B653 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16A0A075B653 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16A0A075B653 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
Trav16A0A075B653 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav16A0A075B653 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16A0A075B653 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav16A0A075B653 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16A0A075B653 Gm12821-201ENSMUST00000120022 600 ntBASIC13.49□□□□□ -0.25
Trav16A0A075B653 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav16A0A075B653 Gm22325-201ENSMUST00000158904 308 ntBASIC13.49□□□□□ -0.25
Trav16A0A075B653 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav16A0A075B653 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16A0A075B653 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.49□□□□□ -0.25
Trav16A0A075B653 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16A0A075B653 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16A0A075B653 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav16A0A075B653 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16A0A075B653 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16A0A075B653 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16A0A075B653 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav16A0A075B653 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav16A0A075B653 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16A0A075B653 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.48□□□□□ -0.25
Trav16A0A075B653 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16A0A075B653 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16A0A075B653 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16A0A075B653 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16A0A075B653 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16A0A075B653 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16A0A075B653 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16A0A075B653 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav16A0A075B653 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16A0A075B653 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16A0A075B653 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.48□□□□□ -0.25
Trav16A0A075B653 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16A0A075B653 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.48□□□□□ -0.25
Trav16A0A075B653 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav16A0A075B653 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16A0A075B653 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16A0A075B653 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16A0A075B653 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16A0A075B653 Idnk-204ENSMUST00000226010 1898 ntBASIC13.48□□□□□ -0.25
Trav16A0A075B653 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav16A0A075B653 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav16A0A075B653 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav16A0A075B653 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Gm6139-201ENSMUST00000079261 882 ntBASIC13.47□□□□□ -0.25
Trav16A0A075B653 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.47□□□□□ -0.25
Trav16A0A075B653 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.47□□□□□ -0.25
Trav16A0A075B653 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.47□□□□□ -0.25
Trav16A0A075B653 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav16A0A075B653 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav16A0A075B653 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav16A0A075B653 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms