Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Gm9959-201ENSMUST00000068277 390 ntBASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav8-1A0A075B641 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav8-1A0A075B641 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav8-1A0A075B641 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav8-1A0A075B641 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav8-1A0A075B641 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav8-1A0A075B641 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Trav8-1A0A075B641 Gm10209-201ENSMUST00000203397 1607 ntBASIC12.52□□□□□ -0.4
Trav8-1A0A075B641 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav8-1A0A075B641 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav8-1A0A075B641 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav8-1A0A075B641 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav8-1A0A075B641 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav8-1A0A075B641 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav8-1A0A075B641 AC121961.1-201ENSMUST00000218594 1779 ntBASIC12.52□□□□□ -0.41
Trav8-1A0A075B641 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC12.52□□□□□ -0.41
Trav8-1A0A075B641 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav8-1A0A075B641 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms