Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav6-1A0A075B5Z8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-1A0A075B5Z8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-1A0A075B5Z8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Trav6-1A0A075B5Z8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-1A0A075B5Z8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav6-1A0A075B5Z8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav6-1A0A075B5Z8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-1A0A075B5Z8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-1A0A075B5Z8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-1A0A075B5Z8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-1A0A075B5Z8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav6-1A0A075B5Z8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-1A0A075B5Z8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-1A0A075B5Z8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav6-1A0A075B5Z8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trav6-1A0A075B5Z8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.02□□□□□ -0.17
Trav6-1A0A075B5Z8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-1A0A075B5Z8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.02□□□□□ -0.17
Trav6-1A0A075B5Z8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-1A0A075B5Z8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-1A0A075B5Z8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-1A0A075B5Z8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-1A0A075B5Z8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav6-1A0A075B5Z8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-1A0A075B5Z8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-1A0A075B5Z8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-1A0A075B5Z8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-1A0A075B5Z8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav6-1A0A075B5Z8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trav6-1A0A075B5Z8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav6-1A0A075B5Z8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav6-1A0A075B5Z8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Trav6-1A0A075B5Z8 Gm2399-201ENSMUST00000104944 225 ntBASIC14.01□□□□□ -0.17
Trav6-1A0A075B5Z8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav6-1A0A075B5Z8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-1A0A075B5Z8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.01□□□□□ -0.17
Trav6-1A0A075B5Z8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-1A0A075B5Z8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-1A0A075B5Z8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-1A0A075B5Z8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav6-1A0A075B5Z8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav6-1A0A075B5Z8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav6-1A0A075B5Z8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav6-1A0A075B5Z8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-1A0A075B5Z8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Trav6-1A0A075B5Z8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-1A0A075B5Z8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-1A0A075B5Z8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-1A0A075B5Z8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-1A0A075B5Z8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-1A0A075B5Z8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14□□□□□ -0.17
Trav6-1A0A075B5Z8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-1A0A075B5Z8 Zfp783-201ENSMUST00000095946 670 ntBASIC14□□□□□ -0.17
Trav6-1A0A075B5Z8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-1A0A075B5Z8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav6-1A0A075B5Z8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav6-1A0A075B5Z8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-1A0A075B5Z8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14□□□□□ -0.17
Trav6-1A0A075B5Z8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trav6-1A0A075B5Z8 Gm37166-201ENSMUST00000195473 2474 ntBASIC14□□□□□ -0.17
Trav6-1A0A075B5Z8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav6-1A0A075B5Z8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav6-1A0A075B5Z8 Gm11841-201ENSMUST00000117060 1963 ntBASIC14□□□□□ -0.17
Trav6-1A0A075B5Z8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-1A0A075B5Z8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav6-1A0A075B5Z8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-1A0A075B5Z8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-1A0A075B5Z8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-1A0A075B5Z8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-1A0A075B5Z8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav6-1A0A075B5Z8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.99□□□□□ -0.17
Trav6-1A0A075B5Z8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-1A0A075B5Z8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-1A0A075B5Z8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-1A0A075B5Z8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-1A0A075B5Z8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-1A0A075B5Z8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav6-1A0A075B5Z8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-1A0A075B5Z8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-1A0A075B5Z8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-1A0A075B5Z8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav6-1A0A075B5Z8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-1A0A075B5Z8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav6-1A0A075B5Z8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav6-1A0A075B5Z8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-1A0A075B5Z8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-1A0A075B5Z8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Trav6-1A0A075B5Z8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-1A0A075B5Z8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-1A0A075B5Z8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-1A0A075B5Z8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-1A0A075B5Z8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Trav6-1A0A075B5Z8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-1A0A075B5Z8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav6-1A0A075B5Z8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-1A0A075B5Z8 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.98□□□□□ -0.17
Trav6-1A0A075B5Z8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav6-1A0A075B5Z8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.98□□□□□ -0.17
Trav6-1A0A075B5Z8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms