Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Gm12156-201ENSMUST00000119188 554 ntBASIC4.31□□□□□ -1.72
Ubr3Q5U430 Gm14389-201ENSMUST00000140453 241 ntBASIC4.31□□□□□ -1.72
Ubr3Q5U430 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.31□□□□□ -1.72
Ubr3Q5U430 Gm23775-201ENSMUST00000158991 249 ntBASIC4.31□□□□□ -1.72
Ubr3Q5U430 Gm4207-201ENSMUST00000173144 960 ntBASIC4.31□□□□□ -1.72
Ubr3Q5U430 Gm28069-201ENSMUST00000189926 214 ntBASIC4.31□□□□□ -1.72
Ubr3Q5U430 Gm44253-201ENSMUST00000203387 628 ntBASIC4.31□□□□□ -1.72
Ubr3Q5U430 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC4.31□□□□□ -1.72
Ubr3Q5U430 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ubr3Q5U430 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.31□□□□□ -1.72
Ubr3Q5U430 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ubr3Q5U430 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.31□□□□□ -1.72
Ubr3Q5U430 Gm6545-201ENSMUST00000217186 1786 ntBASIC4.31□□□□□ -1.72
Ubr3Q5U430 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ubr3Q5U430 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Ubr3Q5U430 Gm43872-201ENSMUST00000203218 2213 ntBASIC4.31□□□□□ -1.72
Ubr3Q5U430 Gm22956-201ENSMUST00000122520 80 ntBASIC4.3□□□□□ -1.72
Ubr3Q5U430 Gm23753-201ENSMUST00000157575 149 ntBASIC4.3□□□□□ -1.72
Ubr3Q5U430 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC4.3□□□□□ -1.72
Ubr3Q5U430 Gm28660-201ENSMUST00000186496 253 ntBASIC4.3□□□□□ -1.72
Ubr3Q5U430 Gm42621-201ENSMUST00000198114 275 ntBASIC4.3□□□□□ -1.72
Ubr3Q5U430 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC4.3□□□□□ -1.72
Ubr3Q5U430 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4.3□□□□□ -1.72
Ubr3Q5U430 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.3□□□□□ -1.72
Ubr3Q5U430 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ubr3Q5U430 Gm38083-201ENSMUST00000194758 3498 ntBASIC4.3□□□□□ -1.72
Ubr3Q5U430 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ubr3Q5U430 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ubr3Q5U430 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ubr3Q5U430 Gm13664-201ENSMUST00000117304 345 ntBASIC4.3□□□□□ -1.72
Ubr3Q5U430 Gm14581-201ENSMUST00000121726 198 ntBASIC4.3□□□□□ -1.72
Ubr3Q5U430 Gm22311-201ENSMUST00000158006 110 ntBASIC4.3□□□□□ -1.72
Ubr3Q5U430 Mir7050-201ENSMUST00000184636 60 ntBASIC4.3□□□□□ -1.72
Ubr3Q5U430 Gm28030-201ENSMUST00000184987 138 ntBASIC4.3□□□□□ -1.72
Ubr3Q5U430 Gm28282-201ENSMUST00000186072 186 ntBASIC4.3□□□□□ -1.72
Ubr3Q5U430 Gm5649-201ENSMUST00000217918 951 ntBASIC4.3□□□□□ -1.72
Ubr3Q5U430 AC115750.1-201ENSMUST00000220441 567 ntBASIC4.3□□□□□ -1.72
Ubr3Q5U430 AC159885.1-201ENSMUST00000222221 199 ntBASIC4.3□□□□□ -1.72
Ubr3Q5U430 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ubr3Q5U430 Gm8724-201ENSMUST00000081668 483 ntBASIC4.3□□□□□ -1.72
Ubr3Q5U430 Gm23615-201ENSMUST00000082602 65 ntBASIC4.3□□□□□ -1.72
Ubr3Q5U430 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.29□□□□□ -1.72
Ubr3Q5U430 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
Ubr3Q5U430 Gm36944-201ENSMUST00000192257 2759 ntBASIC4.29□□□□□ -1.72
Ubr3Q5U430 Gm44049-201ENSMUST00000204905 2984 ntBASIC4.29□□□□□ -1.72
Ubr3Q5U430 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.29□□□□□ -1.72
Ubr3Q5U430 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
Ubr3Q5U430 Gm5362-201ENSMUST00000211968 3085 ntBASIC4.29□□□□□ -1.72
Ubr3Q5U430 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.29□□□□□ -1.72
Ubr3Q5U430 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ubr3Q5U430 Gm23322-201ENSMUST00000104464 167 ntBASIC4.29□□□□□ -1.72
Ubr3Q5U430 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ubr3Q5U430 Gm29668-201ENSMUST00000187802 315 ntBASIC4.29□□□□□ -1.72
Ubr3Q5U430 Gm45400-201ENSMUST00000211603 653 ntBASIC4.29□□□□□ -1.72
Ubr3Q5U430 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.29□□□□□ -1.72
Ubr3Q5U430 AC108416.2-201ENSMUST00000226792 367 ntBASIC4.29□□□□□ -1.72
Ubr3Q5U430 Gm22043-201ENSMUST00000082993 158 ntBASIC4.29□□□□□ -1.72
Ubr3Q5U430 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ubr3Q5U430 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ubr3Q5U430 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Ubr3Q5U430 Gm43300-201ENSMUST00000198540 2043 ntBASIC4.29□□□□□ -1.72
Ubr3Q5U430 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Ubr3Q5U430 Gm42888-201ENSMUST00000202425 4361 ntBASIC4.29□□□□□ -1.72
Ubr3Q5U430 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
Ubr3Q5U430 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ubr3Q5U430 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ubr3Q5U430 Gm6300-201ENSMUST00000192393 1498 ntBASIC4.29□□□□□ -1.72
Ubr3Q5U430 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ubr3Q5U430 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.28□□□□□ -1.72
Ubr3Q5U430 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC4.28□□□□□ -1.72
Ubr3Q5U430 Gm23123-201ENSMUST00000157648 144 ntBASIC4.28□□□□□ -1.72
Ubr3Q5U430 Ear-ps10-201ENSMUST00000161871 460 ntBASIC4.28□□□□□ -1.72
Ubr3Q5U430 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.28□□□□□ -1.72
Ubr3Q5U430 Gm32340-201ENSMUST00000192883 259 ntBASIC4.28□□□□□ -1.72
Ubr3Q5U430 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ubr3Q5U430 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC4.28□□□□□ -1.72
Ubr3Q5U430 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.28□□□□□ -1.72
Ubr3Q5U430 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.28□□□□□ -1.72
Ubr3Q5U430 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ubr3Q5U430 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.28□□□□□ -1.72
Ubr3Q5U430 Gm42479-201ENSMUST00000198654 1356 ntBASIC4.28□□□□□ -1.72
Ubr3Q5U430 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ubr3Q5U430 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC4.28□□□□□ -1.72
Ubr3Q5U430 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Ubr3Q5U430 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.28□□□□□ -1.72
Ubr3Q5U430 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ubr3Q5U430 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC4.28□□□□□ -1.72
Ubr3Q5U430 Gm29105-201ENSMUST00000187256 450 ntBASIC4.28□□□□□ -1.72
Ubr3Q5U430 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
Ubr3Q5U430 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.28□□□□□ -1.72
Ubr3Q5U430 AC091783.4-201ENSMUST00000224940 611 ntBASIC4.28□□□□□ -1.72
Ubr3Q5U430 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
Ubr3Q5U430 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ubr3Q5U430 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ubr3Q5U430 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ubr3Q5U430 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ubr3Q5U430 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ubr3Q5U430 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.27□□□□□ -1.73
Ubr3Q5U430 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.27□□□□□ -1.73
Ubr3Q5U430 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms