Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC4.68□□□□□ -1.66
Col3a1P08121 AC109214.2-201ENSMUST00000220089 358 ntBASIC4.68□□□□□ -1.66
Col3a1P08121 Gm8231-201ENSMUST00000221617 783 ntBASIC4.68□□□□□ -1.66
Col3a1P08121 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC4.68□□□□□ -1.66
Col3a1P08121 AC147639.1-201ENSMUST00000224216 661 ntBASIC4.68□□□□□ -1.66
Col3a1P08121 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col3a1P08121 Gm23925-201ENSMUST00000082471 132 ntBASIC4.68□□□□□ -1.66
Col3a1P08121 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
Col3a1P08121 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col3a1P08121 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col3a1P08121 Gm43872-201ENSMUST00000203218 2213 ntBASIC4.68□□□□□ -1.66
Col3a1P08121 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col3a1P08121 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Col3a1P08121 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col3a1P08121 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col3a1P08121 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col3a1P08121 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col3a1P08121 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col3a1P08121 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col3a1P08121 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col3a1P08121 AC192333.5-201ENSMUST00000224620 2350 ntBASIC4.67□□□□□ -1.66
Col3a1P08121 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col3a1P08121 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Col3a1P08121 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Col3a1P08121 Gm25507-201ENSMUST00000116981 144 ntBASIC4.67□□□□□ -1.66
Col3a1P08121 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col3a1P08121 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Col3a1P08121 Gm22219-201ENSMUST00000157562 319 ntBASIC4.67□□□□□ -1.66
Col3a1P08121 Gm16026-202ENSMUST00000159695 772 ntBASIC4.67□□□□□ -1.66
Col3a1P08121 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Col3a1P08121 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC4.67□□□□□ -1.66
Col3a1P08121 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC4.67□□□□□ -1.66
Col3a1P08121 Gm24520-201ENSMUST00000179510 110 ntBASIC4.67□□□□□ -1.66
Col3a1P08121 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col3a1P08121 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.67□□□□□ -1.66
Col3a1P08121 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC4.67□□□□□ -1.66
Col3a1P08121 Gm31123-201ENSMUST00000192094 666 ntBASIC4.67□□□□□ -1.66
Col3a1P08121 Gm37343-201ENSMUST00000192542 111 ntBASIC4.67□□□□□ -1.66
Col3a1P08121 Gm42509-201ENSMUST00000197390 781 ntBASIC4.67□□□□□ -1.66
Col3a1P08121 Gm42796-201ENSMUST00000199913 1087 ntBASIC4.67□□□□□ -1.66
Col3a1P08121 Gm44181-201ENSMUST00000203106 483 ntBASIC4.67□□□□□ -1.66
Col3a1P08121 Gm44371-201ENSMUST00000204148 467 ntBASIC4.67□□□□□ -1.66
Col3a1P08121 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC4.67□□□□□ -1.66
Col3a1P08121 Gm6303-201ENSMUST00000210123 471 ntBASIC4.67□□□□□ -1.66
Col3a1P08121 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Col3a1P08121 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.67□□□□□ -1.66
Col3a1P08121 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC4.67□□□□□ -1.66
Col3a1P08121 AC167977.2-201ENSMUST00000225676 682 ntBASIC4.67□□□□□ -1.66
Col3a1P08121 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col3a1P08121 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Col3a1P08121 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
Col3a1P08121 Gm23448-201ENSMUST00000083151 104 ntBASIC4.67□□□□□ -1.66
Col3a1P08121 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
Col3a1P08121 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col3a1P08121 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col3a1P08121 AC158605.3-201ENSMUST00000218999 2538 ntBASIC4.67□□□□□ -1.66
Col3a1P08121 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.67□□□□□ -1.66
Col3a1P08121 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Col3a1P08121 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC4.66□□□□□ -1.66
Col3a1P08121 Gm28240-201ENSMUST00000187560 2053 ntBASIC4.66□□□□□ -1.66
Col3a1P08121 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col3a1P08121 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col3a1P08121 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.66□□□□□ -1.66
Col3a1P08121 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col3a1P08121 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col3a1P08121 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col3a1P08121 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Col3a1P08121 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col3a1P08121 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col3a1P08121 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Col3a1P08121 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.66□□□□□ -1.66
Col3a1P08121 Gm15613-201ENSMUST00000118396 326 ntBASIC4.66□□□□□ -1.66
Col3a1P08121 Gm8757-201ENSMUST00000119660 372 ntBASIC4.66□□□□□ -1.66
Col3a1P08121 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.66□□□□□ -1.66
Col3a1P08121 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col3a1P08121 Gm17061-201ENSMUST00000163167 499 ntBASIC4.66□□□□□ -1.66
Col3a1P08121 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Col3a1P08121 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.66□□□□□ -1.66
Col3a1P08121 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.66□□□□□ -1.66
Col3a1P08121 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col3a1P08121 Gm38330-201ENSMUST00000192743 959 ntBASIC4.66□□□□□ -1.66
Col3a1P08121 Gm43708-201ENSMUST00000198857 961 ntBASIC4.66□□□□□ -1.66
Col3a1P08121 Gm42926-201ENSMUST00000200496 697 ntBASIC4.66□□□□□ -1.66
Col3a1P08121 Gm19039-201ENSMUST00000204363 575 ntBASIC4.66□□□□□ -1.66
Col3a1P08121 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4.66□□□□□ -1.66
Col3a1P08121 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC4.66□□□□□ -1.66
Col3a1P08121 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC4.66□□□□□ -1.66
Col3a1P08121 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC4.66□□□□□ -1.66
Col3a1P08121 Gm18899-201ENSMUST00000217663 546 ntBASIC4.66□□□□□ -1.66
Col3a1P08121 AC117656.3-205ENSMUST00000224606 1205 ntBASIC4.66□□□□□ -1.66
Col3a1P08121 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.66□□□□□ -1.66
Col3a1P08121 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col3a1P08121 Gm5185-201ENSMUST00000080271 619 ntBASIC4.66□□□□□ -1.66
Col3a1P08121 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col3a1P08121 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col3a1P08121 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col3a1P08121 Gm43883-201ENSMUST00000204002 3750 ntBASIC4.66□□□□□ -1.66
Col3a1P08121 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col3a1P08121 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
Col3a1P08121 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC4.65□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms