Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.34□□□□□ -1.56
Sox9Q04887 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.56
Sox9Q04887 AC154511.1-201ENSMUST00000222578 1587 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sox9Q04887 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sox9Q04887 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sox9Q04887 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm7269-201ENSMUST00000210819 1373 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sox9Q04887 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Sox9Q04887 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.33□□□□□ -1.56
Sox9Q04887 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sox9Q04887 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Sox9Q04887 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sox9Q04887 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm13379-201ENSMUST00000118053 621 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm14753-201ENSMUST00000118503 246 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm14933-201ENSMUST00000118840 481 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm11843-201ENSMUST00000118984 425 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm15387-201ENSMUST00000120421 648 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm12368-201ENSMUST00000122251 434 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm5963-201ENSMUST00000143451 236 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sox9Q04887 Gm17155-201ENSMUST00000165969 473 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sox9Q04887 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sox9Q04887 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sox9Q04887 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sox9Q04887 Gm25874-201ENSMUST00000178030 79 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sox9Q04887 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sox9Q04887 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sox9Q04887 Gm2092-201ENSMUST00000178887 639 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sox9Q04887 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm2759-201ENSMUST00000179938 639 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm21991-201ENSMUST00000180006 508 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm27957-201ENSMUST00000184054 127 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Mir6412-201ENSMUST00000184477 97 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm28596-201ENSMUST00000185870 696 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.33□□□□□ -1.56
Sox9Q04887 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm29592-201ENSMUST00000189434 370 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sox9Q04887 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sox9Q04887 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm32295-201ENSMUST00000192558 696 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm37164-201ENSMUST00000192809 637 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm31260-201ENSMUST00000193478 696 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm5842-201ENSMUST00000195073 622 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC5.33□□□□□ -1.56
Sox9Q04887 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm19457-201ENSMUST00000200995 448 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm44002-201ENSMUST00000205134 594 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sox9Q04887 Gm7040-201ENSMUST00000223271 443 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sox9Q04887 Gm23686-201ENSMUST00000083241 164 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm5518-201ENSMUST00000084171 648 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sox9Q04887 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sox9Q04887 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sox9Q04887 Gm43882-201ENSMUST00000204871 2264 ntBASIC5.33□□□□□ -1.56
Sox9Q04887 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sox9Q04887 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sox9Q04887 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sox9Q04887 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sox9Q04887 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sox9Q04887 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sox9Q04887 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sox9Q04887 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sox9Q04887 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sox9Q04887 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
Sox9Q04887 Gm45033-201ENSMUST00000206710 3167 ntBASIC5.32□□□□□ -1.56
Sox9Q04887 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.32□□□□□ -1.56
Sox9Q04887 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sox9Q04887 AC162467.3-201ENSMUST00000219716 2172 ntBASIC5.32□□□□□ -1.56
Sox9Q04887 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sox9Q04887 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Sox9Q04887 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Sox9Q04887 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.32□□□□□ -1.56
Sox9Q04887 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.32□□□□□ -1.56
Sox9Q04887 Gm33378-201ENSMUST00000219831 2758 ntBASIC5.32□□□□□ -1.56
Sox9Q04887 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Sox9Q04887 Gm11325-201ENSMUST00000119967 469 ntBASIC5.32□□□□□ -1.56
Sox9Q04887 Gm11522-201ENSMUST00000120533 176 ntBASIC5.32□□□□□ -1.56
Sox9Q04887 Gm14977-201ENSMUST00000121626 812 ntBASIC5.32□□□□□ -1.56
Sox9Q04887 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sox9Q04887 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sox9Q04887 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC5.32□□□□□ -1.56
Sox9Q04887 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.32□□□□□ -1.56
Sox9Q04887 Gm24745-201ENSMUST00000157840 85 ntBASIC5.32□□□□□ -1.56
Sox9Q04887 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms