Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 AC159193.2-201ENSMUST00000220865 4251 ntBASIC2.51□□□□□ -2.01
PrkdcP97313 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PrkdcP97313 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
PrkdcP97313 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PrkdcP97313 Gm14369-201ENSMUST00000121355 285 ntBASIC2.5□□□□□ -2.01
PrkdcP97313 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.5□□□□□ -2.01
PrkdcP97313 AC099578.1-201ENSMUST00000220147 435 ntBASIC2.5□□□□□ -2.01
PrkdcP97313 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.5□□□□□ -2.01
PrkdcP97313 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PrkdcP97313 AV026068-237ENSMUST00000226075 572 ntBASIC2.5□□□□□ -2.01
PrkdcP97313 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
PrkdcP97313 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
PrkdcP97313 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
PrkdcP97313 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PrkdcP97313 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PrkdcP97313 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC2.5□□□□□ -2.01
PrkdcP97313 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
PrkdcP97313 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
PrkdcP97313 Gm3089-201ENSMUST00000200804 1395 ntBASIC2.5□□□□□ -2.01
PrkdcP97313 Gm3302-201ENSMUST00000201462 1395 ntBASIC2.5□□□□□ -2.01
PrkdcP97313 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC2.5□□□□□ -2.01
PrkdcP97313 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
PrkdcP97313 Dbpht2-202ENSMUST00000221311 5341 ntBASIC2.5□□□□□ -2.01
PrkdcP97313 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PrkdcP97313 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC2.5□□□□□ -2.01
PrkdcP97313 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC2.5□□□□□ -2.01
PrkdcP97313 Gm24691-201ENSMUST00000157762 140 ntBASIC2.5□□□□□ -2.01
PrkdcP97313 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
PrkdcP97313 Gm21803-201ENSMUST00000188897 693 ntBASIC2.5□□□□□ -2.01
PrkdcP97313 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
PrkdcP97313 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
PrkdcP97313 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC2.5□□□□□ -2.01
PrkdcP97313 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC2.5□□□□□ -2.01
PrkdcP97313 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
PrkdcP97313 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PrkdcP97313 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC2.5□□□□□ -2.01
PrkdcP97313 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PrkdcP97313 Gm38235-201ENSMUST00000194600 4952 ntBASIC2.5□□□□□ -2.01
PrkdcP97313 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
PrkdcP97313 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PrkdcP97313 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC2.5□□□□□ -2.01
PrkdcP97313 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
PrkdcP97313 Gm16218-201ENSMUST00000155424 388 ntBASIC2.5□□□□□ -2.01
PrkdcP97313 Gm29334-201ENSMUST00000190334 357 ntBASIC2.5□□□□□ -2.01
PrkdcP97313 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.5□□□□□ -2.01
PrkdcP97313 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC2.5□□□□□ -2.01
PrkdcP97313 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC2.5□□□□□ -2.01
PrkdcP97313 Gm6171-201ENSMUST00000220760 645 ntBASIC2.5□□□□□ -2.01
PrkdcP97313 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC2.5□□□□□ -2.01
PrkdcP97313 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC2.5□□□□□ -2.01
PrkdcP97313 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
PrkdcP97313 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PrkdcP97313 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
PrkdcP97313 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
PrkdcP97313 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
PrkdcP97313 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PrkdcP97313 Gm15367-201ENSMUST00000122398 1016 ntBASIC2.49□□□□□ -2.01
PrkdcP97313 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC2.49□□□□□ -2.01
PrkdcP97313 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PrkdcP97313 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PrkdcP97313 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
PrkdcP97313 Gm19418-201ENSMUST00000197436 580 ntBASIC2.49□□□□□ -2.01
PrkdcP97313 AC164100.1-201ENSMUST00000227214 508 ntBASIC2.49□□□□□ -2.01
PrkdcP97313 AC154738.2-201ENSMUST00000227403 1110 ntBASIC2.49□□□□□ -2.01
PrkdcP97313 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PrkdcP97313 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
PrkdcP97313 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
PrkdcP97313 AC160931.3-201ENSMUST00000222111 2267 ntBASIC2.49□□□□□ -2.01
PrkdcP97313 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
PrkdcP97313 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
PrkdcP97313 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
PrkdcP97313 Mir292-201ENSMUST00000104847 82 ntBASIC2.49□□□□□ -2.01
PrkdcP97313 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
PrkdcP97313 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC2.49□□□□□ -2.01
PrkdcP97313 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PrkdcP97313 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.49□□□□□ -2.01
PrkdcP97313 Gm43315-201ENSMUST00000198120 313 ntBASIC2.49□□□□□ -2.01
PrkdcP97313 Gm25203-202ENSMUST00000200458 216 ntBASIC2.49□□□□□ -2.01
PrkdcP97313 Gm25203-201ENSMUST00000082842 215 ntBASIC2.49□□□□□ -2.01
PrkdcP97313 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
PrkdcP97313 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
PrkdcP97313 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
PrkdcP97313 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
PrkdcP97313 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
PrkdcP97313 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
PrkdcP97313 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
PrkdcP97313 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
PrkdcP97313 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
PrkdcP97313 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
PrkdcP97313 Gm43300-201ENSMUST00000198540 2043 ntBASIC2.49□□□□□ -2.01
PrkdcP97313 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PrkdcP97313 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PrkdcP97313 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PrkdcP97313 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
PrkdcP97313 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PrkdcP97313 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
PrkdcP97313 Gm15142-201ENSMUST00000121013 856 ntBASIC2.49□□□□□ -2.01
PrkdcP97313 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC2.49□□□□□ -2.01
PrkdcP97313 Gm29161-201ENSMUST00000188250 699 ntBASIC2.49□□□□□ -2.01
PrkdcP97313 Nras-ps2-201ENSMUST00000195269 178 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms