Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim42Q9D2H5 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Trim42Q9D2H5 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Trim42Q9D2H5 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim42Q9D2H5 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Trim42Q9D2H5 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Gm43201-201ENSMUST00000195925 3416 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Gm22834-201ENSMUST00000102021 79 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Mir449c-201ENSMUST00000102192 109 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Gm23431-201ENSMUST00000104006 107 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Gm13770-201ENSMUST00000117149 305 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Gm13755-201ENSMUST00000118509 305 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Gm14115-201ENSMUST00000119242 482 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Gm14294-201ENSMUST00000119749 751 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Gm16100-201ENSMUST00000120489 231 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Gm16016-201ENSMUST00000120831 550 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Gm12815-201ENSMUST00000121737 135 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim42Q9D2H5 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Gm24477-201ENSMUST00000157438 103 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Gm17081-201ENSMUST00000167363 478 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Gm22642-201ENSMUST00000175352 252 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Mir5107-201ENSMUST00000175586 88 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Gm29124-201ENSMUST00000186576 452 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Gm37189-201ENSMUST00000192131 298 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Gm38185-201ENSMUST00000193195 694 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Gm45048-201ENSMUST00000207058 429 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Gm36501-201ENSMUST00000221857 745 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 CT010454.1-201ENSMUST00000225975 265 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Gm8412-201ENSMUST00000077493 440 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Snord59a-201ENSMUST00000082844 74 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Gm26206-201ENSMUST00000082908 110 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Gm6990-201ENSMUST00000086830 348 ntBASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim42Q9D2H5 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim42Q9D2H5 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Trim42Q9D2H5 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim42Q9D2H5 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Gm43886-201ENSMUST00000205039 2386 ntBASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Gm11221-201ENSMUST00000117230 597 ntBASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Gm6893-201ENSMUST00000118385 522 ntBASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Gm14647-201ENSMUST00000119392 680 ntBASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Gm14863-201ENSMUST00000119648 307 ntBASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Gm5843-201ENSMUST00000121631 476 ntBASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Gm24818-201ENSMUST00000175093 161 ntBASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Gm10136-201ENSMUST00000183196 435 ntBASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Gm27676-201ENSMUST00000183669 61 ntBASIC5.78□□□□□ -1.48
Trim42Q9D2H5 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Gm36984-201ENSMUST00000192770 235 ntBASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Gm18551-201ENSMUST00000195594 642 ntBASIC5.78□□□□□ -1.48
Trim42Q9D2H5 AC151967.1-201ENSMUST00000198146 76 ntBASIC5.78□□□□□ -1.48
Trim42Q9D2H5 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Gm43418-201ENSMUST00000201334 428 ntBASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Gm44611-201ENSMUST00000207507 355 ntBASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim42Q9D2H5 AC166358.7-201ENSMUST00000221132 108 ntBASIC5.78□□□□□ -1.48
Trim42Q9D2H5 AC125543.5-201ENSMUST00000222799 108 ntBASIC5.78□□□□□ -1.48
Trim42Q9D2H5 AC173482.4-201ENSMUST00000225096 348 ntBASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Gm24041-201ENSMUST00000083115 156 ntBASIC5.78□□□□□ -1.48
Trim42Q9D2H5 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim42Q9D2H5 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim42Q9D2H5 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.77□□□□□ -1.49
Trim42Q9D2H5 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim42Q9D2H5 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim42Q9D2H5 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms