Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm26371-201ENSMUST00000157829 104 ntBASIC6.14□□□□□ -1.43
Col18a1P39061 Gm24944-201ENSMUST00000158330 128 ntBASIC6.14□□□□□ -1.43
Col18a1P39061 Gm7281-201ENSMUST00000160010 543 ntBASIC6.14□□□□□ -1.43
Col18a1P39061 Gm9892-201ENSMUST00000182415 992 ntBASIC6.14□□□□□ -1.43
Col18a1P39061 Gm38279-201ENSMUST00000194067 1131 ntBASIC6.14□□□□□ -1.43
Col18a1P39061 AC109212.1-201ENSMUST00000215561 427 ntBASIC6.14□□□□□ -1.43
Col18a1P39061 AC073947.3-201ENSMUST00000215576 766 ntBASIC6.14□□□□□ -1.43
Col18a1P39061 AC154851.2-201ENSMUST00000222172 644 ntBASIC6.14□□□□□ -1.43
Col18a1P39061 AC141425.1-201ENSMUST00000224989 265 ntBASIC6.14□□□□□ -1.43
Col18a1P39061 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col18a1P39061 Gm23678-201ENSMUST00000083157 107 ntBASIC6.14□□□□□ -1.43
Col18a1P39061 Gm23461-201ENSMUST00000083265 107 ntBASIC6.14□□□□□ -1.43
Col18a1P39061 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col18a1P39061 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col18a1P39061 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col18a1P39061 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col18a1P39061 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col18a1P39061 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
Col18a1P39061 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col18a1P39061 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col18a1P39061 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col18a1P39061 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col18a1P39061 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col18a1P39061 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col18a1P39061 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Col18a1P39061 Gm15151-201ENSMUST00000117106 177 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Gm12492-201ENSMUST00000117665 564 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Gm11631-201ENSMUST00000119220 156 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Gm2892-201ENSMUST00000145537 711 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Gm23098-201ENSMUST00000157552 299 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Gm28151-201ENSMUST00000189404 951 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Gm45427-201ENSMUST00000209572 1253 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col18a1P39061 Gm29818-201ENSMUST00000218070 165 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 AC160756.1-201ENSMUST00000227266 235 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col18a1P39061 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col18a1P39061 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Col18a1P39061 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Col18a1P39061 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC6.13□□□□□ -1.43
Col18a1P39061 Gm38307-201ENSMUST00000195630 1840 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
Col18a1P39061 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col18a1P39061 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col18a1P39061 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col18a1P39061 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col18a1P39061 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.13□□□□□ -1.43
Col18a1P39061 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col18a1P39061 Gm18066-201ENSMUST00000210904 1774 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Col18a1P39061 Gm43526-201ENSMUST00000196666 1565 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col18a1P39061 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Col18a1P39061 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC6.13□□□□□ -1.43
Col18a1P39061 Gm12090-201ENSMUST00000118692 758 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Gm14369-201ENSMUST00000121355 285 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Gm14821-201ENSMUST00000121975 435 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Gm15367-201ENSMUST00000122398 1016 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC6.13□□□□□ -1.43
Col18a1P39061 Mir6345-201ENSMUST00000184286 128 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC6.13□□□□□ -1.43
Col18a1P39061 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Gm43476-201ENSMUST00000197873 405 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC6.13□□□□□ -1.43
Col18a1P39061 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC6.13□□□□□ -1.43
Col18a1P39061 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col18a1P39061 Gm44818-201ENSMUST00000206608 358 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC6.13□□□□□ -1.43
Col18a1P39061 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 AC107663.3-201ENSMUST00000225873 601 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 AC150560.3-201ENSMUST00000227442 455 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Col18a1P39061 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Col18a1P39061 Gm25401-201ENSMUST00000082975 106 ntBASIC6.13□□□□□ -1.43
Col18a1P39061 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col18a1P39061 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col18a1P39061 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
Col18a1P39061 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Col18a1P39061 AC153532.3-201ENSMUST00000218660 3848 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col18a1P39061 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Col18a1P39061 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Col18a1P39061 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Col18a1P39061 Gm15624-203ENSMUST00000204811 3402 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Col18a1P39061 Gm24683-201ENSMUST00000104840 88 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Gm14852-201ENSMUST00000120065 647 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Gm14574-201ENSMUST00000120644 279 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Gm13508-201ENSMUST00000121639 775 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Gm25294-201ENSMUST00000122791 104 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Gm21990-201ENSMUST00000124692 383 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Gm23435-201ENSMUST00000157183 156 ntBASIC6.12□□□□□ -1.43
Col18a1P39061 Gm7094-201ENSMUST00000178379 366 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 111 ms