Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Cdh23Q99PF4 Gm37781-201ENSMUST00000194773 3218 ntBASIC3.61□□□□□ -1.83
Cdh23Q99PF4 Gm44530-201ENSMUST00000207920 3559 ntBASIC3.61□□□□□ -1.83
Cdh23Q99PF4 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Gm7452-202ENSMUST00000202891 3039 ntBASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Fbxw23-202ENSMUST00000198480 1388 ntBASIC3.6□□□□□ -1.83
Cdh23Q99PF4 AC122408.2-201ENSMUST00000217901 1391 ntBASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Gm26476-201ENSMUST00000122618 313 ntBASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Gm26215-201ENSMUST00000158584 139 ntBASIC3.6□□□□□ -1.83
Cdh23Q99PF4 AC153729.4-201ENSMUST00000217582 3826 ntBASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Gm43315-201ENSMUST00000198120 313 ntBASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Gm24976-201ENSMUST00000158972 135 ntBASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Gm6510-201ENSMUST00000195916 574 ntBASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Cdh23Q99PF4 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Cdh23Q99PF4 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
Cdh23Q99PF4 Gm12760-201ENSMUST00000117861 482 ntBASIC3.59□□□□□ -1.83
Cdh23Q99PF4 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.59□□□□□ -1.83
Cdh23Q99PF4 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Cdh23Q99PF4 Gm2427-201ENSMUST00000189121 881 ntBASIC3.59□□□□□ -1.83
Cdh23Q99PF4 AC154738.2-201ENSMUST00000227403 1110 ntBASIC3.59□□□□□ -1.83
Cdh23Q99PF4 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC3.59□□□□□ -1.83
Cdh23Q99PF4 Gm10916-201ENSMUST00000080330 483 ntBASIC3.59□□□□□ -1.83
Cdh23Q99PF4 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Cdh23Q99PF4 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Cdh23Q99PF4 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC3.59□□□□□ -1.83
Cdh23Q99PF4 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Cdh23Q99PF4 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC3.59□□□□□ -1.83
Cdh23Q99PF4 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Cdh23Q99PF4 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Cdh23Q99PF4 Gm11830-201ENSMUST00000120175 561 ntBASIC3.59□□□□□ -1.83
Cdh23Q99PF4 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Cdh23Q99PF4 Gm14389-201ENSMUST00000140453 241 ntBASIC3.59□□□□□ -1.83
Cdh23Q99PF4 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.59□□□□□ -1.83
Cdh23Q99PF4 AC154738.4-201ENSMUST00000228310 414 ntBASIC3.59□□□□□ -1.83
Cdh23Q99PF4 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Cdh23Q99PF4 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC3.59□□□□□ -1.83
Cdh23Q99PF4 Gm37789-201ENSMUST00000192862 2889 ntBASIC3.59□□□□□ -1.83
Cdh23Q99PF4 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Cdh23Q99PF4 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Cdh23Q99PF4 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC3.59□□□□□ -1.84
Cdh23Q99PF4 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.84
Cdh23Q99PF4 Gm43390-201ENSMUST00000196614 421 ntBASIC3.59□□□□□ -1.84
Cdh23Q99PF4 Gm35857-201ENSMUST00000212739 178 ntBASIC3.59□□□□□ -1.84
Cdh23Q99PF4 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Cdh23Q99PF4 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Gm15190-201ENSMUST00000120855 276 ntBASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Gm12617-201ENSMUST00000121268 381 ntBASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Gm24787-201ENSMUST00000157380 123 ntBASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Gm20672-201ENSMUST00000176605 261 ntBASIC3.58□□□□□ -1.84
Cdh23Q99PF4 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC3.58□□□□□ -1.84
Cdh23Q99PF4 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Gm38041-201ENSMUST00000194445 661 ntBASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Gm43355-201ENSMUST00000196541 346 ntBASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Gm44972-201ENSMUST00000206419 406 ntBASIC3.58□□□□□ -1.84
Cdh23Q99PF4 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.58□□□□□ -1.84
Cdh23Q99PF4 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Gm43668-201ENSMUST00000197014 5342 ntBASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Gm37531-201ENSMUST00000191628 5415 ntBASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Gm13831-201ENSMUST00000118764 302 ntBASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Gm4222-201ENSMUST00000165784 470 ntBASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.58□□□□□ -1.84
Cdh23Q99PF4 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cdh23Q99PF4 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Gm44439-201ENSMUST00000203379 3592 ntBASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
Cdh23Q99PF4 Gm7071-201ENSMUST00000120458 462 ntBASIC3.57□□□□□ -1.84
Cdh23Q99PF4 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 128.3 ms