Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a3E9PWQ3 Gm27457-201ENSMUST00000184771 156 ntBASIC3.64□□□□□ -1.83
Col6a3E9PWQ3 Gm4859-201ENSMUST00000199625 787 ntBASIC3.64□□□□□ -1.83
Col6a3E9PWQ3 Gm8132-201ENSMUST00000204938 640 ntBASIC3.64□□□□□ -1.83
Col6a3E9PWQ3 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Col6a3E9PWQ3 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Col6a3E9PWQ3 Gm14886-201ENSMUST00000117208 2629 ntBASIC3.64□□□□□ -1.83
Col6a3E9PWQ3 Gm21037-201ENSMUST00000209086 2608 ntBASIC3.64□□□□□ -1.83
Col6a3E9PWQ3 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a3E9PWQ3 Gm11448-201ENSMUST00000120427 450 ntBASIC3.64□□□□□ -1.83
Col6a3E9PWQ3 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a3E9PWQ3 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.64□□□□□ -1.83
Col6a3E9PWQ3 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Col6a3E9PWQ3 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col6a3E9PWQ3 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Col6a3E9PWQ3 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a3E9PWQ3 Gm11253-201ENSMUST00000118486 201 ntBASIC3.64□□□□□ -1.83
Col6a3E9PWQ3 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col6a3E9PWQ3 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Gm22219-201ENSMUST00000157562 319 ntBASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Gm21803-201ENSMUST00000188897 693 ntBASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Gm29038-201ENSMUST00000191543 678 ntBASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Gm7439-201ENSMUST00000214053 835 ntBASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Prpf4b-201ENSMUST00000077853 7844 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Robo2-210ENSMUST00000226478 8059 ntBASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Gm15190-201ENSMUST00000120855 276 ntBASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Gm17187-201ENSMUST00000164622 410 ntBASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Gm45710-201ENSMUST00000212847 215 ntBASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Col6a3E9PWQ3 Gm13167-201ENSMUST00000118554 578 ntBASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Gm13677-201ENSMUST00000120739 595 ntBASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Gm2719-201ENSMUST00000191929 444 ntBASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Gm5983-201ENSMUST00000197739 770 ntBASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Mir378a-201ENSMUST00000198300 66 ntBASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Gm44844-201ENSMUST00000207242 336 ntBASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Gm25642-201ENSMUST00000175137 66 ntBASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Gm20693-201ENSMUST00000177431 211 ntBASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 AC113031.3-201ENSMUST00000226552 190 ntBASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Gm13064-201ENSMUST00000119125 557 ntBASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col6a3E9PWQ3 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Gm12998-201ENSMUST00000122445 789 ntBASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Gm37700-201ENSMUST00000192617 965 ntBASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Gm37534-201ENSMUST00000194483 5222 ntBASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col6a3E9PWQ3 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms