Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a1Q04857 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm35755-201ENSMUST00000222392 2077 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
Col6a1Q04857 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Col6a1Q04857 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm3267-201ENSMUST00000118671 473 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm14901-201ENSMUST00000119001 283 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm14835-201ENSMUST00000119039 315 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm14362-201ENSMUST00000121679 273 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm15254-201ENSMUST00000149567 273 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm23279-201ENSMUST00000157912 97 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm24534-201ENSMUST00000157949 291 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm22650-201ENSMUST00000175138 105 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm22242-201ENSMUST00000175224 118 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm24757-201ENSMUST00000176987 371 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm4714-201ENSMUST00000203395 279 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm44472-201ENSMUST00000204922 943 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm45700-201ENSMUST00000205866 347 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm19880-201ENSMUST00000207731 318 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Col6a1Q04857 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm7751-201ENSMUST00000212868 709 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.99□□□□□ -1.45
Col6a1Q04857 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 n-R5s37-201ENSMUST00000082533 118 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm23511-201ENSMUST00000083084 164 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a1Q04857 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.99□□□□□ -1.45
Col6a1Q04857 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
Col6a1Q04857 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a1Q04857 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.99□□□□□ -1.45
Col6a1Q04857 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a1Q04857 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a1Q04857 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a1Q04857 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Col6a1Q04857 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a1Q04857 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.98□□□□□ -1.45
Col6a1Q04857 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col6a1Q04857 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC5.98□□□□□ -1.45
Col6a1Q04857 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a1Q04857 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Col6a1Q04857 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a1Q04857 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a1Q04857 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Col6a1Q04857 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a1Q04857 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm8202-201ENSMUST00000117682 310 ntBASIC5.98□□□□□ -1.45
Col6a1Q04857 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm11346-201ENSMUST00000118346 704 ntBASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm12328-201ENSMUST00000118611 197 ntBASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm11625-201ENSMUST00000119535 296 ntBASIC5.98□□□□□ -1.45
Col6a1Q04857 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm26024-201ENSMUST00000158657 322 ntBASIC5.98□□□□□ -1.45
Col6a1Q04857 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm25451-201ENSMUST00000177832 121 ntBASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm21809-201ENSMUST00000178495 468 ntBASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm17412-201ENSMUST00000179261 468 ntBASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm27551-201ENSMUST00000184258 77 ntBASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm28141-201ENSMUST00000186676 342 ntBASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm5116-201ENSMUST00000187732 463 ntBASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm29627-201ENSMUST00000187984 463 ntBASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC5.98□□□□□ -1.45
Col6a1Q04857 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm2829-201ENSMUST00000213121 499 ntBASIC5.98□□□□□ -1.45
Col6a1Q04857 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC5.98□□□□□ -1.45
Col6a1Q04857 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.98□□□□□ -1.45
Col6a1Q04857 AC132954.1-201ENSMUST00000221017 342 ntBASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.98□□□□□ -1.45
Col6a1Q04857 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC5.98□□□□□ -1.45
Col6a1Q04857 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.98□□□□□ -1.45
Col6a1Q04857 AC138718.1-201ENSMUST00000225947 1009 ntBASIC5.98□□□□□ -1.45
Col6a1Q04857 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.98□□□□□ -1.45
Col6a1Q04857 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col6a1Q04857 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC5.98□□□□□ -1.45
Col6a1Q04857 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
Col6a1Q04857 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
Col6a1Q04857 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a1Q04857 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a1Q04857 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col6a1Q04857 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Col6a1Q04857 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.98□□□□□ -1.45
Col6a1Q04857 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms