Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC4.74□□□□□ -1.65
Atxn1P54254 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.74□□□□□ -1.65
Atxn1P54254 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Atxn1P54254 Gm38221-201ENSMUST00000195146 365 ntBASIC4.74□□□□□ -1.65
Atxn1P54254 Gm42539-201ENSMUST00000197009 308 ntBASIC4.74□□□□□ -1.65
Atxn1P54254 Gm3010-201ENSMUST00000198805 448 ntBASIC4.74□□□□□ -1.65
Atxn1P54254 Gm43493-201ENSMUST00000199837 202 ntBASIC4.74□□□□□ -1.65
Atxn1P54254 Gm42458-201ENSMUST00000201914 369 ntBASIC4.74□□□□□ -1.65
Atxn1P54254 Gm18861-201ENSMUST00000202509 1186 ntBASIC4.74□□□□□ -1.65
Atxn1P54254 Gm7726-201ENSMUST00000206241 231 ntBASIC4.74□□□□□ -1.65
Atxn1P54254 Gm45081-201ENSMUST00000206281 572 ntBASIC4.74□□□□□ -1.65
Atxn1P54254 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC4.74□□□□□ -1.65
Atxn1P54254 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Atxn1P54254 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC4.74□□□□□ -1.65
Atxn1P54254 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC4.74□□□□□ -1.65
Atxn1P54254 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.74□□□□□ -1.65
Atxn1P54254 CT030684.2-201ENSMUST00000228946 826 ntBASIC4.74□□□□□ -1.65
Atxn1P54254 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Atxn1P54254 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Atxn1P54254 Gm23452-201ENSMUST00000083327 107 ntBASIC4.74□□□□□ -1.65
Atxn1P54254 Gm23099-201ENSMUST00000083454 139 ntBASIC4.74□□□□□ -1.65
Atxn1P54254 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.74□□□□□ -1.65
Atxn1P54254 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Atxn1P54254 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Atxn1P54254 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
Atxn1P54254 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Atxn1P54254 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Atxn1P54254 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.74□□□□□ -1.65
Atxn1P54254 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Atxn1P54254 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Atxn1P54254 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Atxn1P54254 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Atxn1P54254 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Atxn1P54254 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 Gm19074-201ENSMUST00000218915 1429 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Atxn1P54254 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC4.73□□□□□ -1.65
Atxn1P54254 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Atxn1P54254 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Atxn1P54254 Gm12717-201ENSMUST00000118427 983 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 Gm12852-201ENSMUST00000119478 719 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 Gm15022-201ENSMUST00000122074 746 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 Gm23837-201ENSMUST00000122656 286 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Atxn1P54254 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.73□□□□□ -1.65
Atxn1P54254 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Atxn1P54254 Gm3123-201ENSMUST00000163480 480 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Atxn1P54254 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Atxn1P54254 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC4.73□□□□□ -1.65
Atxn1P54254 Gm20574-201ENSMUST00000182867 917 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 Gm27538-201ENSMUST00000185065 294 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC4.73□□□□□ -1.65
Atxn1P54254 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC4.73□□□□□ -1.65
Atxn1P54254 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Atxn1P54254 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Atxn1P54254 Gm37416-201ENSMUST00000193596 318 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 Gm9632-201ENSMUST00000195934 643 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 Gm18452-201ENSMUST00000202968 1111 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 Gm44038-201ENSMUST00000203952 889 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 Gm45007-201ENSMUST00000206237 366 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 Gm44648-201ENSMUST00000208267 329 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 Gm5917-201ENSMUST00000217638 721 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.73□□□□□ -1.65
Atxn1P54254 AC156803.1-201ENSMUST00000224407 820 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 AC090496.1-201ENSMUST00000226020 260 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 AC158981.3-201ENSMUST00000226844 1024 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Atxn1P54254 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Atxn1P54254 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Atxn1P54254 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Atxn1P54254 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Atxn1P54254 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Atxn1P54254 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Atxn1P54254 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.73□□□□□ -1.65
Atxn1P54254 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Atxn1P54254 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Atxn1P54254 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Atxn1P54254 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.73□□□□□ -1.65
Atxn1P54254 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Atxn1P54254 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Atxn1P54254 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Atxn1P54254 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Atxn1P54254 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Atxn1P54254 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Atxn1P54254 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Atxn1P54254 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Atxn1P54254 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Atxn1P54254 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Atxn1P54254 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Atxn1P54254 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Atxn1P54254 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Atxn1P54254 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms