Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Rfx1P48377 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Rfx1P48377 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC6.41□□□□□ -1.38
Rfx1P48377 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Rfx1P48377 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Rfx1P48377 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
Rfx1P48377 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Rfx1P48377 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC6.41□□□□□ -1.38
Rfx1P48377 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Rfx1P48377 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Rfx1P48377 Gm37400-201ENSMUST00000193148 3605 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
Rfx1P48377 Gm37726-201ENSMUST00000193246 3886 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC6.4□□□□□ -1.38
Rfx1P48377 AC154640.4-201ENSMUST00000226647 4640 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Gm25917-201ENSMUST00000104267 130 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Gm14142-201ENSMUST00000117833 296 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Gm11854-201ENSMUST00000117839 446 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Gm15399-201ENSMUST00000118055 724 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Gm12717-201ENSMUST00000118427 983 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Gm13804-201ENSMUST00000119552 172 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Gm12095-201ENSMUST00000121962 816 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Gm25909-201ENSMUST00000157619 121 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Gm24853-201ENSMUST00000158026 121 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Gm23386-201ENSMUST00000158585 144 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC6.4□□□□□ -1.38
Rfx1P48377 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC6.4□□□□□ -1.38
Rfx1P48377 Gm22932-201ENSMUST00000175510 72 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Rfx1P48377 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Rfx1P48377 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC6.4□□□□□ -1.38
Rfx1P48377 Gm27679-201ENSMUST00000184612 84 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Mir6952-201ENSMUST00000185092 61 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC6.4□□□□□ -1.38
Rfx1P48377 Trbv12-3-201ENSMUST00000192675 372 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC6.4□□□□□ -1.38
Rfx1P48377 Gm43652-201ENSMUST00000196219 675 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Gm19418-201ENSMUST00000197436 580 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Rfx1P48377 AC131677.1-201ENSMUST00000218721 535 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
Rfx1P48377 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Rfx1P48377 Gm5612-201ENSMUST00000053326 375 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Rfx1P48377 Gm22807-201ENSMUST00000082737 129 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Gm22364-201ENSMUST00000083097 98 ntBASIC6.4□□□□□ -1.38
Rfx1P48377 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Rfx1P48377 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Rfx1P48377 Gm37589-201ENSMUST00000193609 3994 ntBASIC6.4□□□□□ -1.39
Rfx1P48377 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Rfx1P48377 Gm38067-201ENSMUST00000192346 1911 ntBASIC6.4□□□□□ -1.39
Rfx1P48377 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Rfx1P48377 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Rfx1P48377 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Rfx1P48377 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
Rfx1P48377 Gm18163-201ENSMUST00000197877 1643 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Rfx1P48377 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Rfx1P48377 Gm44567-201ENSMUST00000205645 2631 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Rfx1P48377 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC6.39□□□□□ -1.39
Rfx1P48377 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Rfx1P48377 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Rfx1P48377 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Gm11606-201ENSMUST00000120706 617 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Gm22959-201ENSMUST00000122514 303 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Gm25294-201ENSMUST00000122791 104 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Rfx1P48377 Gm25970-201ENSMUST00000157165 86 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Gm22563-201ENSMUST00000157333 269 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Gm26410-201ENSMUST00000157670 261 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Gm23450-201ENSMUST00000178285 91 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Gm22631-201ENSMUST00000179656 94 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC6.39□□□□□ -1.39
Rfx1P48377 Gm27332-201ENSMUST00000184893 112 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Gm28724-201ENSMUST00000186149 625 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Rfx1P48377 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC6.39□□□□□ -1.39
Rfx1P48377 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 AC157822.1-201ENSMUST00000196643 80 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Igkv4-75-201ENSMUST00000197204 359 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC6.39□□□□□ -1.39
Rfx1P48377 Gm7039-201ENSMUST00000205138 346 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC6.39□□□□□ -1.39
Rfx1P48377 AV026068-216ENSMUST00000223874 328 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Ap3m1-208ENSMUST00000224016 764 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 CT010506.2-201ENSMUST00000225618 183 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Rfx1P48377 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Rfx1P48377 Gm22229-201ENSMUST00000082987 108 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Mir342-201ENSMUST00000083502 99 ntBASIC6.39□□□□□ -1.39
Rfx1P48377 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Rfx1P48377 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Rfx1P48377 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Rfx1P48377 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms