Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 AC131068.3-201ENSMUST00000228438 1456 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Gm12173-201ENSMUST00000117622 273 ntBASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Amd-ps1-201ENSMUST00000120127 994 ntBASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Gm25965-201ENSMUST00000157170 93 ntBASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Gm16303-201ENSMUST00000161498 390 ntBASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Gm28304-201ENSMUST00000185977 312 ntBASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Gm29256-201ENSMUST00000189094 312 ntBASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Gm28484-201ENSMUST00000190606 312 ntBASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Mir7682-201ENSMUST00000198467 58 ntBASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Gm4045-201ENSMUST00000204076 310 ntBASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Gm3189-201ENSMUST00000205595 832 ntBASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Gm45247-201ENSMUST00000210757 309 ntBASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 AC132384.13-201ENSMUST00000219556 1159 ntBASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Gm46998-201ENSMUST00000221444 330 ntBASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Gm17872-201ENSMUST00000222550 532 ntBASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 AC117202.1-201ENSMUST00000227007 445 ntBASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Gm23407-201ENSMUST00000082538 91 ntBASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Trafd1Q3UDK1 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
Trafd1Q3UDK1 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
Trafd1Q3UDK1 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
Trafd1Q3UDK1 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm15994-201ENSMUST00000118029 402 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Anp32-ps-201ENSMUST00000118265 388 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm12379-201ENSMUST00000119607 391 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm13170-201ENSMUST00000119716 643 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm13865-201ENSMUST00000120957 865 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm14776-201ENSMUST00000121029 887 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm11385-201ENSMUST00000121513 570 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Klra11-ps-201ENSMUST00000122033 810 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm25292-201ENSMUST00000122797 322 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm6245-201ENSMUST00000164699 768 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Mir5134-201ENSMUST00000175529 78 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm11394-201ENSMUST00000181421 517 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Mir6537-201ENSMUST00000184150 110 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm29513-201ENSMUST00000185741 202 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm6802-202ENSMUST00000186566 126 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm30280-201ENSMUST00000192214 262 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Trbv28-201ENSMUST00000192804 264 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm38279-201ENSMUST00000194067 1131 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm4644-201ENSMUST00000197587 400 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm8035-201ENSMUST00000204625 687 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 Gm8556-201ENSMUST00000210437 664 ntBASIC4.02□□□□□ -1.77
Trafd1Q3UDK1 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms