Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm22174-201ENSMUST00000175050 125 ntBASIC4.42□□□□□ -1.7
Col1a1P11087 Gm22692-201ENSMUST00000175055 125 ntBASIC4.42□□□□□ -1.7
Col1a1P11087 Gm27634-201ENSMUST00000175060 126 ntBASIC4.42□□□□□ -1.7
Col1a1P11087 Gm26460-201ENSMUST00000175061 126 ntBASIC4.42□□□□□ -1.7
Col1a1P11087 Gm22460-201ENSMUST00000175269 124 ntBASIC4.42□□□□□ -1.7
Col1a1P11087 Gm24365-201ENSMUST00000175384 125 ntBASIC4.42□□□□□ -1.7
Col1a1P11087 Gm44310-201ENSMUST00000175424 126 ntBASIC4.42□□□□□ -1.7
Col1a1P11087 Gm22639-201ENSMUST00000175591 125 ntBASIC4.42□□□□□ -1.7
Col1a1P11087 Gm24979-201ENSMUST00000178626 126 ntBASIC4.42□□□□□ -1.7
Col1a1P11087 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Col1a1P11087 Gm27743-201ENSMUST00000185136 126 ntBASIC4.42□□□□□ -1.7
Col1a1P11087 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.42□□□□□ -1.7
Col1a1P11087 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.42□□□□□ -1.7
Col1a1P11087 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Col1a1P11087 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col1a1P11087 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Col1a1P11087 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Col1a1P11087 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.42□□□□□ -1.7
Col1a1P11087 Gm42614-201ENSMUST00000198724 1554 ntBASIC4.42□□□□□ -1.7
Col1a1P11087 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col1a1P11087 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col1a1P11087 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.41□□□□□ -1.7
Col1a1P11087 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Col1a1P11087 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.41□□□□□ -1.7
Col1a1P11087 Gm14861-201ENSMUST00000119451 455 ntBASIC4.41□□□□□ -1.7
Col1a1P11087 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC4.41□□□□□ -1.7
Col1a1P11087 Gm3454-201ENSMUST00000185571 412 ntBASIC4.41□□□□□ -1.7
Col1a1P11087 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
Col1a1P11087 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col1a1P11087 Gm6680-201ENSMUST00000192789 950 ntBASIC4.41□□□□□ -1.7
Col1a1P11087 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC4.41□□□□□ -1.7
Col1a1P11087 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.41□□□□□ -1.7
Col1a1P11087 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC4.41□□□□□ -1.7
Col1a1P11087 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Col1a1P11087 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC4.4□□□□□ -1.7
Col1a1P11087 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Col1a1P11087 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
Col1a1P11087 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Col1a1P11087 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Col1a1P11087 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Col1a1P11087 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Col1a1P11087 AC149294.7-201ENSMUST00000227475 1432 ntBASIC4.4□□□□□ -1.7
Col1a1P11087 Gm43341-201ENSMUST00000200104 1308 ntBASIC4.4□□□□□ -1.71
Col1a1P11087 Gm22936-201ENSMUST00000103955 126 ntBASIC4.4□□□□□ -1.71
Col1a1P11087 Gm14534-201ENSMUST00000120045 357 ntBASIC4.4□□□□□ -1.71
Col1a1P11087 Gm26476-201ENSMUST00000122618 313 ntBASIC4.4□□□□□ -1.71
Col1a1P11087 Gm25519-201ENSMUST00000158392 127 ntBASIC4.4□□□□□ -1.71
Col1a1P11087 Gm8641-201ENSMUST00000186995 826 ntBASIC4.4□□□□□ -1.71
Col1a1P11087 Gm29563-201ENSMUST00000187249 496 ntBASIC4.4□□□□□ -1.71
Col1a1P11087 Gm21617-201ENSMUST00000188297 691 ntBASIC4.4□□□□□ -1.71
Col1a1P11087 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC4.4□□□□□ -1.71
Col1a1P11087 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Col1a1P11087 Gm35876-201ENSMUST00000205044 459 ntBASIC4.4□□□□□ -1.71
Col1a1P11087 Gm6303-201ENSMUST00000210123 471 ntBASIC4.4□□□□□ -1.71
Col1a1P11087 Gm45327-201ENSMUST00000211612 565 ntBASIC4.4□□□□□ -1.71
Col1a1P11087 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.4□□□□□ -1.71
Col1a1P11087 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Col1a1P11087 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Col1a1P11087 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Col1a1P11087 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Col1a1P11087 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
Col1a1P11087 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col1a1P11087 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Col1a1P11087 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col1a1P11087 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Col1a1P11087 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Col1a1P11087 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.39□□□□□ -1.71
Col1a1P11087 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.39□□□□□ -1.71
Col1a1P11087 Gm28148-201ENSMUST00000186924 697 ntBASIC4.39□□□□□ -1.71
Col1a1P11087 AC167250.1-201ENSMUST00000213739 3813 ntBASIC4.39□□□□□ -1.71
Col1a1P11087 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Col1a1P11087 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col1a1P11087 Gm2710-201ENSMUST00000073196 603 ntBASIC4.39□□□□□ -1.71
Col1a1P11087 AF357428-201ENSMUST00000083815 69 ntBASIC4.39□□□□□ -1.71
Col1a1P11087 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Col1a1P11087 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Col1a1P11087 Gm42801-201ENSMUST00000202562 2865 ntBASIC4.39□□□□□ -1.71
Col1a1P11087 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Col1a1P11087 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Col1a1P11087 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Col1a1P11087 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Col1a1P11087 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.39□□□□□ -1.71
Col1a1P11087 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Col1a1P11087 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Col1a1P11087 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col1a1P11087 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col1a1P11087 Gm43313-201ENSMUST00000201398 2235 ntBASIC4.38□□□□□ -1.71
Col1a1P11087 Gm9157-201ENSMUST00000117673 225 ntBASIC4.38□□□□□ -1.71
Col1a1P11087 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Col1a1P11087 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col1a1P11087 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
Col1a1P11087 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC4.38□□□□□ -1.71
Col1a1P11087 Gm19030-201ENSMUST00000194947 552 ntBASIC4.38□□□□□ -1.71
Col1a1P11087 Gm19596-201ENSMUST00000203685 739 ntBASIC4.38□□□□□ -1.71
Col1a1P11087 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC4.38□□□□□ -1.71
Col1a1P11087 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Col1a1P11087 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col1a1P11087 Gm9765-201ENSMUST00000043170 321 ntBASIC4.38□□□□□ -1.71
Col1a1P11087 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Col1a1P11087 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms