Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Trim56Q80VI1 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Trim56Q80VI1 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim56Q80VI1 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim56Q80VI1 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Trim56Q80VI1 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim56Q80VI1 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim56Q80VI1 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trim56Q80VI1 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trim56Q80VI1 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trim56Q80VI1 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC6.18□□□□□ -1.42
Trim56Q80VI1 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC6.18□□□□□ -1.42
Trim56Q80VI1 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim56Q80VI1 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim56Q80VI1 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim56Q80VI1 Gm22273-201ENSMUST00000104040 132 ntBASIC6.18□□□□□ -1.42
Trim56Q80VI1 Gm14677-201ENSMUST00000117866 486 ntBASIC6.18□□□□□ -1.42
Trim56Q80VI1 Gm14867-201ENSMUST00000120156 866 ntBASIC6.18□□□□□ -1.42
Trim56Q80VI1 n-R5s61-201ENSMUST00000122711 118 ntBASIC6.18□□□□□ -1.42
Trim56Q80VI1 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC6.18□□□□□ -1.42
Trim56Q80VI1 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim56Q80VI1 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Trim56Q80VI1 Mir5103-201ENSMUST00000175111 79 ntBASIC6.18□□□□□ -1.42
Trim56Q80VI1 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim56Q80VI1 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim56Q80VI1 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC6.18□□□□□ -1.42
Trim56Q80VI1 Gm29524-201ENSMUST00000190819 699 ntBASIC6.18□□□□□ -1.42
Trim56Q80VI1 Gm34176-201ENSMUST00000192621 474 ntBASIC6.18□□□□□ -1.42
Trim56Q80VI1 Trbv24-201ENSMUST00000194614 347 ntBASIC6.18□□□□□ -1.42
Trim56Q80VI1 Gm36985-201ENSMUST00000195595 379 ntBASIC6.18□□□□□ -1.42
Trim56Q80VI1 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC6.18□□□□□ -1.42
Trim56Q80VI1 Mir6994-201ENSMUST00000198985 73 ntBASIC6.18□□□□□ -1.42
Trim56Q80VI1 Gm42896-201ENSMUST00000201249 1113 ntBASIC6.18□□□□□ -1.42
Trim56Q80VI1 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim56Q80VI1 Gm17780-201ENSMUST00000207142 612 ntBASIC6.18□□□□□ -1.42
Trim56Q80VI1 Gm45344-201ENSMUST00000211610 341 ntBASIC6.18□□□□□ -1.42
Trim56Q80VI1 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trim56Q80VI1 AC131720.1-201ENSMUST00000218629 2132 ntBASIC6.18□□□□□ -1.42
Trim56Q80VI1 AC104832.1-201ENSMUST00000222938 550 ntBASIC6.18□□□□□ -1.42
Trim56Q80VI1 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC6.18□□□□□ -1.42
Trim56Q80VI1 n-R5s37-201ENSMUST00000082533 118 ntBASIC6.18□□□□□ -1.42
Trim56Q80VI1 Gm22265-201ENSMUST00000082947 116 ntBASIC6.18□□□□□ -1.42
Trim56Q80VI1 Mir20a-201ENSMUST00000083508 107 ntBASIC6.18□□□□□ -1.42
Trim56Q80VI1 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim56Q80VI1 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trim56Q80VI1 AC124556.1-201ENSMUST00000218256 1319 ntBASIC6.18□□□□□ -1.42
Trim56Q80VI1 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim56Q80VI1 AC112142.1-203ENSMUST00000228670 2472 ntBASIC6.18□□□□□ -1.42
Trim56Q80VI1 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Trim56Q80VI1 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.18□□□□□ -1.42
Trim56Q80VI1 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trim56Q80VI1 Gm19335-201ENSMUST00000195836 2069 ntBASIC6.18□□□□□ -1.42
Trim56Q80VI1 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.17□□□□□ -1.42
Trim56Q80VI1 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Gm12878-201ENSMUST00000118744 332 ntBASIC6.17□□□□□ -1.42
Trim56Q80VI1 Gm7657-201ENSMUST00000118851 666 ntBASIC6.17□□□□□ -1.42
Trim56Q80VI1 Gm13785-201ENSMUST00000119099 690 ntBASIC6.17□□□□□ -1.42
Trim56Q80VI1 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Gm20545-201ENSMUST00000174739 210 ntBASIC6.17□□□□□ -1.42
Trim56Q80VI1 Gm25451-201ENSMUST00000177832 121 ntBASIC6.17□□□□□ -1.42
Trim56Q80VI1 Gm25873-201ENSMUST00000180317 107 ntBASIC6.17□□□□□ -1.42
Trim56Q80VI1 Gm44456-201ENSMUST00000196554 89 ntBASIC6.17□□□□□ -1.42
Trim56Q80VI1 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Gm44923-201ENSMUST00000206673 85 ntBASIC6.17□□□□□ -1.42
Trim56Q80VI1 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Gm45660-201ENSMUST00000210267 151 ntBASIC6.17□□□□□ -1.42
Trim56Q80VI1 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim56Q80VI1 AC141884.1-201ENSMUST00000226327 636 ntBASIC6.17□□□□□ -1.42
Trim56Q80VI1 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trim56Q80VI1 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim56Q80VI1 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trim56Q80VI1 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Trim56Q80VI1 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.16□□□□□ -1.42
Trim56Q80VI1 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trim56Q80VI1 Gm8979-201ENSMUST00000183386 7296 ntBASIC6.16□□□□□ -1.42
Trim56Q80VI1 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Trim56Q80VI1 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
Trim56Q80VI1 Gm42955-201ENSMUST00000197355 3393 ntBASIC6.16□□□□□ -1.42
Trim56Q80VI1 Gm43386-201ENSMUST00000199654 4001 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms