Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm13131-201ENSMUST00000122228 321 ntBASIC5.9□□□□□ -1.46
Trim28Q62318 Gm12368-201ENSMUST00000122251 434 ntBASIC5.9□□□□□ -1.46
Trim28Q62318 Gm25290-201ENSMUST00000122796 144 ntBASIC5.9□□□□□ -1.46
Trim28Q62318 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC5.9□□□□□ -1.46
Trim28Q62318 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Trim28Q62318 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC5.9□□□□□ -1.46
Trim28Q62318 Gm26355-201ENSMUST00000158220 105 ntBASIC5.9□□□□□ -1.46
Trim28Q62318 Gm24773-201ENSMUST00000158513 99 ntBASIC5.9□□□□□ -1.46
Trim28Q62318 Mir5128-201ENSMUST00000175217 84 ntBASIC5.9□□□□□ -1.46
Trim28Q62318 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Trim28Q62318 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.9□□□□□ -1.46
Trim28Q62318 Gm7299-201ENSMUST00000194441 581 ntBASIC5.9□□□□□ -1.46
Trim28Q62318 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.9□□□□□ -1.46
Trim28Q62318 Gm10988-201ENSMUST00000209150 1088 ntBASIC5.9□□□□□ -1.46
Trim28Q62318 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC5.9□□□□□ -1.46
Trim28Q62318 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC5.9□□□□□ -1.46
Trim28Q62318 AC152979.4-201ENSMUST00000219893 379 ntBASIC5.9□□□□□ -1.46
Trim28Q62318 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.9□□□□□ -1.46
Trim28Q62318 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC5.9□□□□□ -1.46
Trim28Q62318 AC133176.1-201ENSMUST00000226668 219 ntBASIC5.9□□□□□ -1.46
Trim28Q62318 AC163295.1-201ENSMUST00000227840 314 ntBASIC5.9□□□□□ -1.46
Trim28Q62318 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Trim28Q62318 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Trim28Q62318 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Trim28Q62318 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Trim28Q62318 AC144772.3-201ENSMUST00000228829 3126 ntBASIC5.9□□□□□ -1.47
Trim28Q62318 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim28Q62318 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim28Q62318 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Trim28Q62318 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
Trim28Q62318 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
Trim28Q62318 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Trim28Q62318 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim28Q62318 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Trim28Q62318 Gm6429-201ENSMUST00000117144 475 ntBASIC5.89□□□□□ -1.47
Trim28Q62318 Gm12062-201ENSMUST00000117533 259 ntBASIC5.89□□□□□ -1.47
Trim28Q62318 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Trim28Q62318 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim28Q62318 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC5.89□□□□□ -1.47
Trim28Q62318 Gm10444-201ENSMUST00000126708 148 ntBASIC5.89□□□□□ -1.47
Trim28Q62318 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC5.89□□□□□ -1.47
Trim28Q62318 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim28Q62318 Gm4725-201ENSMUST00000151048 587 ntBASIC5.89□□□□□ -1.47
Trim28Q62318 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim28Q62318 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim28Q62318 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC5.89□□□□□ -1.47
Trim28Q62318 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Trim28Q62318 Gm21894-201ENSMUST00000179631 546 ntBASIC5.89□□□□□ -1.47
Trim28Q62318 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC5.89□□□□□ -1.47
Trim28Q62318 Gm28859-201ENSMUST00000186650 616 ntBASIC5.89□□□□□ -1.47
Trim28Q62318 Gm17967-201ENSMUST00000195319 647 ntBASIC5.89□□□□□ -1.47
Trim28Q62318 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Trim28Q62318 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC5.89□□□□□ -1.47
Trim28Q62318 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC5.89□□□□□ -1.47
Trim28Q62318 AC140930.4-201ENSMUST00000220750 150 ntBASIC5.89□□□□□ -1.47
Trim28Q62318 Gm9973-202ENSMUST00000220926 166 ntBASIC5.89□□□□□ -1.47
Trim28Q62318 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Trim28Q62318 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Trim28Q62318 Mir27a-201ENSMUST00000083510 87 ntBASIC5.89□□□□□ -1.47
Trim28Q62318 AC153964.1-201ENSMUST00000219677 3142 ntBASIC5.89□□□□□ -1.47
Trim28Q62318 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.89□□□□□ -1.47
Trim28Q62318 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim28Q62318 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim28Q62318 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim28Q62318 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim28Q62318 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Trim28Q62318 Gm19176-201ENSMUST00000222149 1831 ntBASIC5.88□□□□□ -1.47
Trim28Q62318 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Trim28Q62318 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim28Q62318 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC5.88□□□□□ -1.47
Trim28Q62318 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Trim28Q62318 Gm9432-201ENSMUST00000117810 759 ntBASIC5.88□□□□□ -1.47
Trim28Q62318 Gm12884-201ENSMUST00000120371 325 ntBASIC5.88□□□□□ -1.47
Trim28Q62318 Gm6062-201ENSMUST00000120462 631 ntBASIC5.88□□□□□ -1.47
Trim28Q62318 Gm22613-201ENSMUST00000122679 292 ntBASIC5.88□□□□□ -1.47
Trim28Q62318 Gm25807-201ENSMUST00000122783 305 ntBASIC5.88□□□□□ -1.47
Trim28Q62318 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC5.88□□□□□ -1.47
Trim28Q62318 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC5.88□□□□□ -1.47
Trim28Q62318 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC5.88□□□□□ -1.47
Trim28Q62318 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC5.88□□□□□ -1.47
Trim28Q62318 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC5.88□□□□□ -1.47
Trim28Q62318 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim28Q62318 Mir6960-201ENSMUST00000183449 61 ntBASIC5.88□□□□□ -1.47
Trim28Q62318 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim28Q62318 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC5.88□□□□□ -1.47
Trim28Q62318 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.88□□□□□ -1.47
Trim28Q62318 Gm7639-201ENSMUST00000212608 484 ntBASIC5.88□□□□□ -1.47
Trim28Q62318 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Trim28Q62318 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim28Q62318 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim28Q62318 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim28Q62318 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim28Q62318 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim28Q62318 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim28Q62318 AC124746.1-201ENSMUST00000227535 1300 ntBASIC5.88□□□□□ -1.47
Trim28Q62318 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim28Q62318 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim28Q62318 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Trim28Q62318 Gm6982-201ENSMUST00000118752 1560 ntBASIC5.88□□□□□ -1.47
Trim28Q62318 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms