Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm19694-201ENSMUST00000192364 505 ntBASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Col6a3E9PWQ3 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Gm14212-201ENSMUST00000122023 826 ntBASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Gm22651-201ENSMUST00000157872 94 ntBASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 AC164092.3-201ENSMUST00000216970 1323 ntBASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Gm24014-201ENSMUST00000157728 157 ntBASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Gm24190-201ENSMUST00000157976 216 ntBASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Gm44972-201ENSMUST00000206419 406 ntBASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Gm46199-201ENSMUST00000220373 1693 ntBASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Col6a3E9PWQ3 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Col6a3E9PWQ3 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
Col6a3E9PWQ3 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC3.71□□□□□ -1.81
Col6a3E9PWQ3 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
Col6a3E9PWQ3 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.81
Col6a3E9PWQ3 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
Col6a3E9PWQ3 Gm44688-201ENSMUST00000209083 537 ntBASIC3.71□□□□□ -1.81
Col6a3E9PWQ3 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
Col6a3E9PWQ3 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.71□□□□□ -1.81
Col6a3E9PWQ3 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Gm5754-201ENSMUST00000118774 892 ntBASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Gm29259-201ENSMUST00000186396 694 ntBASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Gm44964-201ENSMUST00000207011 273 ntBASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Dbpht2-202ENSMUST00000221311 5341 ntBASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Gm22910-201ENSMUST00000178568 132 ntBASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Col6a3E9PWQ3 AC162908.1-201ENSMUST00000219164 4563 ntBASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Mir105-201ENSMUST00000104655 80 ntBASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Gm12492-201ENSMUST00000117665 564 ntBASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Zfp389-201ENSMUST00000118425 675 ntBASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Gm16545-201ENSMUST00000161968 463 ntBASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Gm27505-201ENSMUST00000185071 110 ntBASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Gm18350-201ENSMUST00000187395 955 ntBASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Gm43361-201ENSMUST00000196562 4690 ntBASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Gm18000-201ENSMUST00000212153 800 ntBASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col6a3E9PWQ3 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms