Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Gm24429-201ENSMUST00000104076 132 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Gm13808-201ENSMUST00000121353 184 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Gm13868-201ENSMUST00000122411 294 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Gm15878-201ENSMUST00000127561 306 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Gm14710-201ENSMUST00000146082 1066 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Gm24930-201ENSMUST00000158315 83 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Mir1963-201ENSMUST00000158594 59 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Gm7609-204ENSMUST00000161424 461 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Gm28429-201ENSMUST00000188521 363 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Gm37543-201ENSMUST00000192443 1031 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Gm43369-201ENSMUST00000196373 1552 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Gm9173-201ENSMUST00000198054 400 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Gm18193-201ENSMUST00000210017 772 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 AC147615.2-201ENSMUST00000219876 2154 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Gm36501-201ENSMUST00000221857 745 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 AC158525.1-201ENSMUST00000223806 576 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 AC192088.2-201ENSMUST00000227590 411 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Mir337-201ENSMUST00000083592 97 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Gm24763-201ENSMUST00000083688 190 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Gm10704-201ENSMUST00000098952 730 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.44□□□□□ -1.54
Ccdc9Q8VC31 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm18609-201ENSMUST00000203370 3601 ntBASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm13607-201ENSMUST00000117875 539 ntBASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm11805-201ENSMUST00000121238 600 ntBASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm17153-201ENSMUST00000171314 490 ntBASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Mir3080-201ENSMUST00000175010 79 ntBASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm18397-201ENSMUST00000176704 587 ntBASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm4859-201ENSMUST00000199625 787 ntBASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm44281-201ENSMUST00000203090 166 ntBASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm44282-201ENSMUST00000203199 190 ntBASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm4574-201ENSMUST00000207804 542 ntBASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm21041-201ENSMUST00000214829 823 ntBASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm19256-201ENSMUST00000218550 231 ntBASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm7768-201ENSMUST00000222988 597 ntBASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 AC154510.1-201ENSMUST00000223925 737 ntBASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm22287-201ENSMUST00000083197 107 ntBASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm42681-201ENSMUST00000197999 1611 ntBASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm3616-201ENSMUST00000174430 2514 ntBASIC5.43□□□□□ -1.54
Ccdc9Q8VC31 Gm3683-201ENSMUST00000175701 2513 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms