Protein–RNA interactions for Protein: Q9Z1X0

Ccl27, C-C motif chemokine 27, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl27Q9Z1X0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccl27Q9Z1X0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccl27Q9Z1X0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.22■□□□□ 0.19
Ccl27Q9Z1X0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccl27Q9Z1X0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.22■□□□□ 0.19
Ccl27Q9Z1X0 Gm10812-201ENSMUST00000099864 546 ntBASIC16.22■□□□□ 0.19
Ccl27Q9Z1X0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccl27Q9Z1X0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ccl27Q9Z1X0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccl27Q9Z1X0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccl27Q9Z1X0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ccl27Q9Z1X0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ccl27Q9Z1X0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ccl27Q9Z1X0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ccl27Q9Z1X0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccl27Q9Z1X0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl27Q9Z1X0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl27Q9Z1X0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl27Q9Z1X0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl27Q9Z1X0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl27Q9Z1X0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl27Q9Z1X0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl27Q9Z1X0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl27Q9Z1X0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl27Q9Z1X0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl27Q9Z1X0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl27Q9Z1X0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl27Q9Z1X0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl27Q9Z1X0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.21■□□□□ 0.19
Ccl27Q9Z1X0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl27Q9Z1X0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.21■□□□□ 0.19
Ccl27Q9Z1X0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.21■□□□□ 0.19
Ccl27Q9Z1X0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.21■□□□□ 0.19
Ccl27Q9Z1X0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl27Q9Z1X0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl27Q9Z1X0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl27Q9Z1X0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl27Q9Z1X0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl27Q9Z1X0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccl27Q9Z1X0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccl27Q9Z1X0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl27Q9Z1X0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl27Q9Z1X0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl27Q9Z1X0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl27Q9Z1X0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Ccl27Q9Z1X0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl27Q9Z1X0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl27Q9Z1X0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.2■□□□□ 0.18
Ccl27Q9Z1X0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl27Q9Z1X0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl27Q9Z1X0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl27Q9Z1X0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.2■□□□□ 0.18
Ccl27Q9Z1X0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl27Q9Z1X0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl27Q9Z1X0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl27Q9Z1X0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl27Q9Z1X0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl27Q9Z1X0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccl27Q9Z1X0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl27Q9Z1X0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl27Q9Z1X0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ccl27Q9Z1X0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccl27Q9Z1X0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccl27Q9Z1X0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccl27Q9Z1X0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccl27Q9Z1X0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccl27Q9Z1X0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccl27Q9Z1X0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccl27Q9Z1X0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.18■□□□□ 0.18
Ccl27Q9Z1X0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.18■□□□□ 0.18
Ccl27Q9Z1X0 Gm4974-201ENSMUST00000209974 875 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms