Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CcsQ9WU84 Gm27405-201ENSMUST00000184201 112 ntBASIC13.58□□□□□ -0.24
CcsQ9WU84 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.58□□□□□ -0.24
CcsQ9WU84 Gm42778-201ENSMUST00000199644 553 ntBASIC13.58□□□□□ -0.24
CcsQ9WU84 Gm42569-201ENSMUST00000200539 472 ntBASIC13.58□□□□□ -0.24
CcsQ9WU84 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.58□□□□□ -0.24
CcsQ9WU84 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CcsQ9WU84 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CcsQ9WU84 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CcsQ9WU84 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CcsQ9WU84 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CcsQ9WU84 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CcsQ9WU84 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CcsQ9WU84 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.58□□□□□ -0.24
CcsQ9WU84 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CcsQ9WU84 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CcsQ9WU84 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CcsQ9WU84 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CcsQ9WU84 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CcsQ9WU84 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CcsQ9WU84 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CcsQ9WU84 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CcsQ9WU84 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.57□□□□□ -0.24
CcsQ9WU84 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CcsQ9WU84 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CcsQ9WU84 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CcsQ9WU84 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CcsQ9WU84 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CcsQ9WU84 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CcsQ9WU84 Gm26571-201ENSMUST00000181399 666 ntBASIC13.57□□□□□ -0.24
CcsQ9WU84 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.57□□□□□ -0.24
CcsQ9WU84 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.57□□□□□ -0.24
CcsQ9WU84 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CcsQ9WU84 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CcsQ9WU84 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CcsQ9WU84 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CcsQ9WU84 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.57□□□□□ -0.24
CcsQ9WU84 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CcsQ9WU84 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CcsQ9WU84 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CcsQ9WU84 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CcsQ9WU84 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CcsQ9WU84 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CcsQ9WU84 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CcsQ9WU84 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CcsQ9WU84 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.56□□□□□ -0.24
CcsQ9WU84 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.56□□□□□ -0.24
CcsQ9WU84 Gm7291-201ENSMUST00000199147 382 ntBASIC13.56□□□□□ -0.24
CcsQ9WU84 AV356131-201ENSMUST00000206201 750 ntBASIC13.56□□□□□ -0.24
CcsQ9WU84 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.56□□□□□ -0.24
CcsQ9WU84 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.56□□□□□ -0.24
CcsQ9WU84 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CcsQ9WU84 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CcsQ9WU84 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CcsQ9WU84 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CcsQ9WU84 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CcsQ9WU84 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CcsQ9WU84 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CcsQ9WU84 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CcsQ9WU84 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CcsQ9WU84 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CcsQ9WU84 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.55□□□□□ -0.24
CcsQ9WU84 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CcsQ9WU84 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CcsQ9WU84 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CcsQ9WU84 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.55□□□□□ -0.24
CcsQ9WU84 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CcsQ9WU84 Gm9988-201ENSMUST00000069786 435 ntBASIC13.55□□□□□ -0.24
CcsQ9WU84 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.55□□□□□ -0.24
CcsQ9WU84 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CcsQ9WU84 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CcsQ9WU84 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CcsQ9WU84 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
CcsQ9WU84 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms