Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atp6ap1Q9R1Q9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atp6ap1Q9R1Q9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atp6ap1Q9R1Q9 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.1■□□□□ 0.33
Atp6ap1Q9R1Q9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atp6ap1Q9R1Q9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atp6ap1Q9R1Q9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Atp6ap1Q9R1Q9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atp6ap1Q9R1Q9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
Atp6ap1Q9R1Q9 Gm22240-201ENSMUST00000175225 82 ntBASIC17.1■□□□□ 0.33
Atp6ap1Q9R1Q9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Atp6ap1Q9R1Q9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atp6ap1Q9R1Q9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atp6ap1Q9R1Q9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.1■□□□□ 0.33
Atp6ap1Q9R1Q9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atp6ap1Q9R1Q9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.1■□□□□ 0.33
Atp6ap1Q9R1Q9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atp6ap1Q9R1Q9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.1■□□□□ 0.33
Atp6ap1Q9R1Q9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp6ap1Q9R1Q9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp6ap1Q9R1Q9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp6ap1Q9R1Q9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atp6ap1Q9R1Q9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Atp6ap1Q9R1Q9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.09■□□□□ 0.33
Atp6ap1Q9R1Q9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atp6ap1Q9R1Q9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Atp6ap1Q9R1Q9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp6ap1Q9R1Q9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp6ap1Q9R1Q9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp6ap1Q9R1Q9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Atp6ap1Q9R1Q9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp6ap1Q9R1Q9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp6ap1Q9R1Q9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp6ap1Q9R1Q9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp6ap1Q9R1Q9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atp6ap1Q9R1Q9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atp6ap1Q9R1Q9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Atp6ap1Q9R1Q9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Atp6ap1Q9R1Q9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atp6ap1Q9R1Q9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.08■□□□□ 0.33
Atp6ap1Q9R1Q9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atp6ap1Q9R1Q9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Atp6ap1Q9R1Q9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atp6ap1Q9R1Q9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atp6ap1Q9R1Q9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atp6ap1Q9R1Q9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atp6ap1Q9R1Q9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atp6ap1Q9R1Q9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atp6ap1Q9R1Q9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.08■□□□□ 0.32
Atp6ap1Q9R1Q9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atp6ap1Q9R1Q9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atp6ap1Q9R1Q9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atp6ap1Q9R1Q9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atp6ap1Q9R1Q9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atp6ap1Q9R1Q9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Atp6ap1Q9R1Q9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.07■□□□□ 0.32
Atp6ap1Q9R1Q9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atp6ap1Q9R1Q9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atp6ap1Q9R1Q9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atp6ap1Q9R1Q9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Atp6ap1Q9R1Q9 Mir8112-201ENSMUST00000184382 131 ntBASIC17.07■□□□□ 0.32
Atp6ap1Q9R1Q9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atp6ap1Q9R1Q9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atp6ap1Q9R1Q9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atp6ap1Q9R1Q9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.07■□□□□ 0.32
Atp6ap1Q9R1Q9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atp6ap1Q9R1Q9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atp6ap1Q9R1Q9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atp6ap1Q9R1Q9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atp6ap1Q9R1Q9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Atp6ap1Q9R1Q9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.07■□□□□ 0.32
Atp6ap1Q9R1Q9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp6ap1Q9R1Q9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atp6ap1Q9R1Q9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp6ap1Q9R1Q9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp6ap1Q9R1Q9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atp6ap1Q9R1Q9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp6ap1Q9R1Q9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp6ap1Q9R1Q9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp6ap1Q9R1Q9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp6ap1Q9R1Q9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp6ap1Q9R1Q9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp6ap1Q9R1Q9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp6ap1Q9R1Q9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp6ap1Q9R1Q9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp6ap1Q9R1Q9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp6ap1Q9R1Q9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp6ap1Q9R1Q9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.06■□□□□ 0.32
Atp6ap1Q9R1Q9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Atp6ap1Q9R1Q9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.06■□□□□ 0.32
Atp6ap1Q9R1Q9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Atp6ap1Q9R1Q9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atp6ap1Q9R1Q9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atp6ap1Q9R1Q9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atp6ap1Q9R1Q9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Atp6ap1Q9R1Q9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.05■□□□□ 0.32
Atp6ap1Q9R1Q9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atp6ap1Q9R1Q9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atp6ap1Q9R1Q9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atp6ap1Q9R1Q9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms