Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Gm2399-201ENSMUST00000104944 225 ntBASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ccl28Q9JIL2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl28Q9JIL2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl28Q9JIL2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl28Q9JIL2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccl28Q9JIL2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl28Q9JIL2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl28Q9JIL2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.12□□□□□ -0.15
Ccl28Q9JIL2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.12□□□□□ -0.15
Ccl28Q9JIL2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl28Q9JIL2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl28Q9JIL2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl28Q9JIL2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccl28Q9JIL2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl28Q9JIL2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl28Q9JIL2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccl28Q9JIL2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl28Q9JIL2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl28Q9JIL2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ccl28Q9JIL2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl28Q9JIL2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl28Q9JIL2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Ccl28Q9JIL2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ccl28Q9JIL2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl28Q9JIL2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl28Q9JIL2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.11□□□□□ -0.15
Ccl28Q9JIL2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.11□□□□□ -0.15
Ccl28Q9JIL2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccl28Q9JIL2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl28Q9JIL2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl28Q9JIL2 Gm38285-201ENSMUST00000192928 922 ntBASIC14.11□□□□□ -0.15
Ccl28Q9JIL2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccl28Q9JIL2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl28Q9JIL2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ccl28Q9JIL2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl28Q9JIL2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl28Q9JIL2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl28Q9JIL2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccl28Q9JIL2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ccl28Q9JIL2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ccl28Q9JIL2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Ccl28Q9JIL2 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ccl28Q9JIL2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ccl28Q9JIL2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms